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major_capsid_protein
Euk-VirEpizootic_haematopoietic_necrosis_virus
major_capsid_protein__YP_009182013__Epizootic_haematopoietic_necrosis_virus__100217
Identity
- Accession:
- YP_009182013 ↗
- Protein ID:
- major_capsid_protein
- Kingdom:
- euk
Quality
81.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Ranavirus›
Epizootic_haematopoietic_necrosis_virus
TaxID: 100217
Cluster
View cluster (126 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 270-450
Domain cluster:
rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04451.18 best | Capsid_NCLDV | 204.1 | 2.60e-60 | 100.0% | 90.3% |
D2
medium
residues 46-85_115-153_177-211_243-268
Domain cluster:
rep: major_capsid_protein__YP_009508644__Common_midwife_toad_virus__540070__D48-85_114-155_177-212_243-266
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16903.13 best | Capsid_N | 48.9 | 8.70e-13 | 72.9% | 45.9% |
D3
medium
residues 86-114_154-176_212-242
Domain cluster:
rep: major_capsid_protein__YP_031669__Frog_virus_3__10493__D86-108_163-177_214-242