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major_capsid_protein

Euk-Vir

Short-finned_eel_ranavirus

major_capsid_protein__YP_009259466__Short-finned_eel_ranavirus__638660

Identity

Accession:
YP_009259466 ↗
Protein ID:
major_capsid_protein
Kingdom:
euk

Quality

78.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Ranavirus› Short-finned_eel_ranavirus

TaxID: 638660

Cluster

View cluster (126 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 274-450
PDB
Domain cluster: rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04451.18 best Capsid_NCLDV 200.5 3.20e-59 100.0% 88.3%
D2 medium residues 46-81_106-160_178-213_243-273
PDB
Domain cluster: rep: OQ709206.1__WGH20694.1__SEA_SCOUPSA_14__00014__D13-196
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16903.13 best Capsid_N 82.6 4.10e-23 98.1% 54.1%
D3 medium residues 82-105_161-177_214-242
PDB
Domain cluster: rep: major_capsid_protein__YP_031669__Frog_virus_3__10493__D86-108_163-177_214-242