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major_capsid_protein
Euk-VirCommon_midwife_toad_virus
major_capsid_protein__YP_009508644__Common_midwife_toad_virus__540070
Identity
- Accession:
- YP_009508644 ↗
- Protein ID:
- major_capsid_protein
- Kingdom:
- euk
Quality
79.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Ranavirus›
Common_midwife_toad_virus
TaxID: 540070
Cluster
View cluster (126 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 270-449
Domain cluster:
rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04451.18 best | Capsid_NCLDV | 203.5 | 3.90e-60 | 100.0% | 89.8% |
D2
medium
residues 48-85_114-155_177-212_243-266
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16903.13 best | Capsid_N | 59.2 | 5.90e-16 | 72.9% | 50.2% |
CATH (76)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tipA01 | 2.70.9.10 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Adenovirus Type 2 Hexon, domain 4 | 0.95 | 92.0 | 8.11e-01 | 100.0% | 97.3% |
| 2vvfA02 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 64.0 | 6.69e-01 | 94.3% | 94.5% |
| 1hx6A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 61.0 | 6.12e-01 | 94.3% | 90.1% |
| 5tipA02 | 2.70.9.20 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Major capsid protein Vp54 | 0.70 | 63.0 | 5.39e-01 | 96.4% | 96.3% |
| 6brbD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 36.0 | 4.39e-01 | 89.3% | 81.6% |
| 3b83C00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 37.0 | 4.26e-01 | 92.1% | 75.8% |
| 2gu9A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 38.0 | 4.34e-01 | 92.9% | 76.7% |
| 1yllA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 38.0 | 4.51e-01 | 92.9% | 85.9% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.65 | 43.0 | 4.94e-01 | 95.7% | 94.9% |
| 3jqwC00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 44.0 | 4.72e-01 | 91.4% | 80.2% |
| 5zbeA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 38.0 | 4.24e-01 | 98.6% | 75.7% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 36.0 | 4.04e-01 | 94.3% | 71.0% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 51.0 | 5.40e-01 | 95.7% | 96.7% |
| 3h8uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 37.0 | 3.94e-01 | 94.3% | 65.6% |
| 3rnsA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 35.0 | 4.03e-01 | 92.1% | 75.0% |
| 3r8qA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 35.0 | 4.18e-01 | 91.4% | 82.6% |
| 5z06A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.62 | 51.0 | 4.77e-01 | 87.9% | 100.0% |
| 2waoA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 44.0 | 4.87e-01 | 89.3% | 92.8% |
| 1sq4A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 37.0 | 3.74e-01 | 97.9% | 57.6% |
| 6xaxA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 33.0 | 4.07e-01 | 87.1% | 84.7% |
| 2pn5A08 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 43.0 | 4.71e-01 | 94.3% | 90.1% |
| 2b8mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 37.0 | 4.13e-01 | 97.1% | 77.1% |
| 4e2gC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 34.0 | 3.61e-01 | 92.9% | 59.5% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.61 | 43.0 | 4.70e-01 | 92.1% | 88.0% |
| 1i5pA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 51.0 | 4.95e-01 | 92.1% | 93.7% |
| 2qjvA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 38.0 | 4.18e-01 | 99.3% | 78.8% |
| 2pfwA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 39.0 | 4.37e-01 | 87.1% | 83.8% |
| 5b71E00 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.60 | 35.0 | 4.19e-01 | 90.7% | 87.1% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 37.0 | 3.58e-01 | 92.9% | 54.4% |
| 2luwA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 40.0 | 4.55e-01 | 89.3% | 95.0% |
| 2b39A10 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 44.0 | 4.76e-01 | 94.3% | 93.1% |
| 2hr0B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 4.23e-01 | 93.6% | 83.5% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 32.0 | 3.79e-01 | 91.4% | 81.8% |
| 1yudA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 38.0 | 3.71e-01 | 96.4% | 60.0% |
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 37.0 | 4.07e-01 | 82.1% | 81.8% |
| 1v70A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 37.0 | 4.22e-01 | 85.7% | 87.6% |
| 3rnsA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 36.0 | 3.99e-01 | 82.9% | 80.6% |
| 3h7jA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 38.0 | 4.12e-01 | 85.7% | 81.6% |
| 1yhfA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 35.0 | 3.95e-01 | 82.1% | 79.1% |
| 4myjA04 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 39.0 | 4.04e-01 | 100.0% | 76.0% |
| 4yrdA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 37.0 | 3.93e-01 | 96.4% | 75.6% |
| 6nwmA01 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.56 | 36.0 | 3.56e-01 | 99.3% | 58.1% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 44.0 | 4.21e-01 | 96.4% | 70.1% |
| 1tq5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 36.0 | 4.09e-01 | 80.7% | 84.3% |
| 3at0A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 49.0 | 4.64e-01 | 93.6% | 85.1% |
| 2yc2A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 47.0 | 4.86e-01 | 91.4% | 100.0% |
| 6r3mA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.55 | 47.0 | 4.45e-01 | 91.4% | 98.2% |
| 2okxA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 43.0 | 4.08e-01 | 93.6% | 69.6% |
| 7ehgC01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 46.0 | 4.82e-01 | 91.4% | 100.0% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.55 | 46.0 | 4.38e-01 | 90.7% | 90.4% |
| 1sfnA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 39.0 | 3.24e-01 | 96.4% | 42.0% |
| 2pqqA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 34.0 | 3.40e-01 | 94.3% | 58.5% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 39.0 | 3.78e-01 | 98.6% | 65.4% |
| 1ne6A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 33.0 | 3.56e-01 | 93.6% | 69.7% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 45.0 | 4.64e-01 | 89.3% | 100.0% |
| 2xbzA00 | 2.60.40.2380 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 4.65e-01 | 90.0% | 95.5% |
| 7zvmA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 37.0 | 4.19e-01 | 87.1% | 97.1% |
| 2mngA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 37.0 | 3.87e-01 | 99.3% | 77.1% |
| 2xvlA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 4.41e-01 | 90.0% | 100.0% |
| 2mhfA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 33.0 | 3.35e-01 | 92.9% | 62.2% |
| 6lsvA01 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.52 | 41.0 | 3.20e-01 | 100.0% | 36.3% |
| 3iwzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 33.0 | 3.44e-01 | 95.7% | 65.7% |
| 4qt6A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.52 | 43.0 | 4.18e-01 | 89.3% | 98.7% |
| 2g19A00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 38.0 | 3.33e-01 | 96.4% | 48.6% |
| 3d82A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 32.0 | 3.66e-01 | 84.3% | 83.3% |
| 1gqgC01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 39.0 | 3.98e-01 | 90.0% | 79.3% |
| 1sefA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 38.0 | 4.11e-01 | 96.4% | 90.8% |
| 1gqgC02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 39.0 | 3.54e-01 | 87.9% | 58.7% |
| 6ncyA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 44.0 | 3.95e-01 | 92.1% | 85.9% |
| 2o8qA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 35.0 | 3.71e-01 | 86.4% | 78.7% |
| 4rd7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 36.0 | 3.92e-01 | 82.1% | 84.9% |
| 7vqmA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 4.01e-01 | 92.1% | 97.8% |
| 3es4A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 35.0 | 3.84e-01 | 90.7% | 86.2% |
| 4rz7A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 33.0 | 3.49e-01 | 95.7% | 74.4% |
| 1hw5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 33.0 | 3.43e-01 | 93.6% | 70.5% |
| 3eo6A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 32.0 | 3.55e-01 | 82.1% | 82.1% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2995054 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.95 | 92.0 | 7.66e-01 | 100.0% | 84.3% |
| 4850052 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.94 | 91.0 | 7.79e-01 | 100.0% | 93.6% |
| 4863940 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.93 | 68.0 | 6.73e-01 | 74.3% | 99.3% |
| 2995198 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.92 | 89.0 | 7.82e-01 | 100.0% | 92.6% |
| 2497010 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.90 | 86.0 | 7.15e-01 | 100.0% | 96.5% |
| 4850054 | 10.2.1.54 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N | 0.78 | 68.0 | 6.29e-01 | 90.0% | 85.8% |
| 2995199 | 10.2.1.41 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_NCLDV | 0.69 | 62.0 | 5.57e-01 | 96.4% | 95.2% |
| 4300379 | 10.12.1.22 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › KduI | 0.67 | 42.0 | 4.51e-01 | 98.6% | 72.5% |
| 5037452 | 10.12.1.22 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › KduI | 0.67 | 42.0 | 3.37e-01 | 99.3% | 32.2% |
| 5010649 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.67 | 42.0 | 5.13e-01 | 91.4% | 100.0% |
| 5045833 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 48.0 | 5.38e-01 | 95.7% | 99.0% |
| 5016528 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 45.0 | 4.88e-01 | 92.9% | 85.2% |
| 3710431 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.65 | 42.0 | 4.93e-01 | 95.0% | 95.8% |
| 4002321 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 46.0 | 5.21e-01 | 92.1% | 99.0% |
| 5047633 | 10.1.2.183 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC | 0.64 | 46.0 | 5.14e-01 | 94.3% | 97.1% |
| 5084091 | 10.1.2.183 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC | 0.63 | 42.0 | 4.98e-01 | 88.6% | 100.0% |
| 3246388 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 45.0 | 4.87e-01 | 92.9% | 88.2% |
| 4955697 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.62 | 36.0 | 4.14e-01 | 92.9% | 76.2% |
| 3967117 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 40.0 | 4.82e-01 | 87.9% | 100.0% |
| 4979872 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.62 | 37.0 | 3.99e-01 | 96.4% | 68.3% |
| 5039600 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 46.0 | 4.95e-01 | 92.1% | 94.2% |
| 5077191 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 41.0 | 4.73e-01 | 90.7% | 100.0% |
| 3169527 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 43.0 | 4.83e-01 | 89.3% | 100.0% |
| 3370751 | 3156.1.1.4 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase | 0.59 | 36.0 | 3.73e-01 | 87.1% | 63.7% |
| 3607484 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 48.0 | 4.60e-01 | 89.3% | 100.0% |
| 2129545 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.58 | 35.0 | 2.99e-01 | 92.9% | 35.0% |
| 3386919 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.58 | 39.0 | 4.38e-01 | 89.3% | 88.2% |
| 4969103 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 37.0 | 4.39e-01 | 89.3% | 98.9% |
| 3964767 | 10.12.1.126 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF28724 | 0.57 | 39.0 | 3.77e-01 | 100.0% | 60.6% |
| 3493221 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.57 | 34.0 | 3.55e-01 | 97.9% | 61.5% |
| 3215390 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.57 | 44.0 | 4.69e-01 | 90.7% | 95.0% |
| 3688349 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.57 | 40.0 | 4.29e-01 | 89.3% | 84.2% |
| 4928370 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.57 | 39.0 | 4.19e-01 | 87.9% | 80.6% |
| 5056893 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 45.0 | 4.80e-01 | 94.3% | 98.3% |
| 3476162 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 44.0 | 4.77e-01 | 93.6% | 98.3% |
| 3958311 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.56 | 40.0 | 4.21e-01 | 89.3% | 80.8% |
| 3585444 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.56 | 33.0 | 3.29e-01 | 93.6% | 54.5% |
| 4996579 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.56 | 36.0 | 4.03e-01 | 90.0% | 84.3% |
| 5051442 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 43.0 | 4.00e-01 | 97.1% | 63.9% |
| 4996864 | 10.12.1.4 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › dTDP_sugar_isom | 0.56 | 37.0 | 3.49e-01 | 94.3% | 54.7% |
| 3882930 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.55 | 43.0 | 4.18e-01 | 90.7% | 74.2% |
| 3713551 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 46.0 | 4.60e-01 | 89.3% | 97.9% |
| 3374682 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.55 | 47.0 | 3.64e-01 | 92.1% | 99.7% |
| 3677238 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 41.0 | 4.22e-01 | 88.6% | 83.1% |
| 3321600 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 41.0 | 3.98e-01 | 89.3% | 71.6% |
| 3967122 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 36.0 | 3.90e-01 | 82.9% | 80.5% |
| 4961572 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 40.0 | 4.15e-01 | 89.3% | 82.3% |
| 4987174 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 38.0 | 4.12e-01 | 87.9% | 85.8% |
| 2583136 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 41.0 | 3.86e-01 | 96.4% | 64.2% |
| 3446530 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 46.0 | 4.82e-01 | 95.0% | 100.0% |
| 3529263 | 10.32.1.205 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ams1-like_1st | 0.54 | 46.0 | 4.55e-01 | 91.4% | 98.6% |
| 3716810 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 47.0 | 4.38e-01 | 94.3% | 91.8% |
| 1180014 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 37.0 | 4.02e-01 | 84.3% | 86.8% |
| 4030602 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.53 | 35.0 | 2.75e-01 | 100.0% | 29.4% |
| 3347492 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.53 | 41.0 | 3.81e-01 | 90.0% | 65.1% |
| 3973758 | 10.12.1.98 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer | 0.53 | 38.0 | 4.16e-01 | 90.7% | 92.1% |
| 4252647 | 10.32.1.88 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N2 | 0.52 | 45.0 | 3.96e-01 | 92.9% | 94.6% |
| 3971446 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 38.0 | 4.08e-01 | 90.0% | 90.4% |
| 3797653 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 33.0 | 3.46e-01 | 95.7% | 67.7% |
| 3682877 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 41.0 | 4.06e-01 | 90.7% | 78.0% |
| 3466480 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.52 | 40.0 | 3.74e-01 | 90.0% | 65.1% |
| 3806757 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.52 | 41.0 | 4.04e-01 | 89.3% | 78.7% |
| 3385123 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.52 | 41.0 | 3.98e-01 | 90.0% | 74.4% |
| 3613333 | 5095.1.1.0 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen | 0.52 | 46.0 | 4.35e-01 | 96.4% | 95.2% |
| 4949707 | 10.12.1.98 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer | 0.52 | 37.0 | 3.43e-01 | 90.0% | 57.2% |
| 151244 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.52 | 31.0 | 3.13e-01 | 89.3% | 54.8% |
| 3973004 | 208.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain › Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain | 0.52 | 37.0 | 3.38e-01 | 90.7% | 54.4% |
| 5063377 | 5095.1.1.1 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 | 0.51 | 43.0 | 4.42e-01 | 90.7% | 99.3% |
| 3265251 | 5095.1.1.0 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen | 0.51 | 37.0 | 4.07e-01 | 82.9% | 95.5% |
| 3781908 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 44.0 | 4.58e-01 | 92.9% | 100.0% |
| 3564721 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.51 | 33.0 | 2.94e-01 | 95.7% | 42.9% |
| 3363402 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 40.0 | 3.92e-01 | 89.3% | 76.1% |
| 4357938 | 10.12.1.154 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer, ManC_GMP_beta-helix | 0.51 | 36.0 | 3.35e-01 | 88.6% | 57.7% |
| 3266615 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 40.0 | 4.12e-01 | 93.6% | 89.2% |
| 3773906 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.50 | 32.0 | 2.84e-01 | 93.6% | 40.9% |
| 3479771 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.50 | 32.0 | 2.87e-01 | 93.6% | 41.9% |
D3
medium
residues 86-113_156-176_213-242
Domain cluster:
rep: major_capsid_protein__YP_031669__Frog_virus_3__10493__D86-108_163-177_214-242