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major_capsid_protein
Euk-VirPenicillium_chrysogenum_virus
major_capsid_protein__YP_392483__Penicillium_chrysogenum_virus__158372
Identity
- Accession:
- YP_392483 ↗
- Protein ID:
- major_capsid_protein
- Kingdom:
- euk
Quality
64.5
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Chrymotiviricetes›
Ghabrivirales›
Chrysoviridae›
Alphachrysovirus›
Penicillium_chrysogenum_virus
TaxID: 158372
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 145-197
Domain cluster:
rep: capsid_protein__YP_009337889__Isaria_javanica_chrysovirus_1__1930960__D126-186
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21685.4 best | Fungal_virus_P2_N | 44.1 | 1.70e-11 | 100.0% | 14.2% |
D2
medium
residues 198-376
Domain cluster:
rep: putative_coat_protein__YP_001531162__Alphachrysovirus_cerasi__284687__D184-333
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21685.4 best | Fungal_virus_P2_N | 253.0 | 5.70e-75 | 100.0% | 49.2% |
D3
medium
residues 717-807
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22144.2 best | Fungal_virus_P2_C | 157.6 | 6.20e-46 | 100.0% | 19.5% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 45.0 | 3.90e-01 | 72.5% | 76.2% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 44.0 | 3.82e-01 | 71.4% | 79.3% |
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.63 | 37.0 | 4.09e-01 | 79.1% | 72.2% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 44.0 | 4.14e-01 | 75.8% | 99.1% |
| 4uobA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.59 | 39.0 | 3.53e-01 | 81.3% | 48.4% |
| 8b2sA01 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.58 | 41.0 | 3.55e-01 | 75.8% | 56.5% |
| 6ll8A01 | 3.90.1640.10 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) | 0.58 | 49.0 | 3.94e-01 | 95.6% | 91.4% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 47.0 | 4.48e-01 | 90.1% | 98.1% |
| 5ijiA01 | 1.10.8.500 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase | 0.56 | 33.0 | 3.86e-01 | 83.5% | 91.2% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 42.0 | 4.17e-01 | 86.8% | 97.0% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 42.0 | 4.09e-01 | 85.7% | 94.2% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 42.0 | 4.13e-01 | 87.9% | 96.9% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.51 | 44.0 | 4.44e-01 | 95.6% | 100.0% |
| 1vplA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 43.0 | 3.16e-01 | 91.2% | 41.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026729 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.62 | 42.0 | 3.67e-01 | 70.3% | 80.0% |
| 3890040 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.54 | 43.0 | 3.79e-01 | 87.9% | 69.3% |
| None | — | 0.53 | 43.0 | 3.32e-01 | 91.2% | 48.3% | |
| 4030134 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.53 | 47.0 | 4.18e-01 | 100.0% | 81.5% |
| 4029259 | 3273.1.1.4 ↗ | alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › CLAMP | 0.53 | 42.0 | 3.94e-01 | 85.7% | 69.6% |
| 5037039 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.53 | 45.0 | 4.08e-01 | 95.6% | 80.8% |
| 3490619 | 4156.1.1.1 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 | 0.53 | 39.0 | 3.29e-01 | 78.0% | 75.6% |
| 4996071 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.52 | 42.0 | 4.26e-01 | 87.9% | 100.0% |
| 5025139 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.52 | 43.0 | 4.31e-01 | 92.3% | 100.0% |
| 5064398 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.52 | 43.0 | 4.18e-01 | 90.1% | 93.0% |
| 4982983 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.51 | 41.0 | 4.12e-01 | 89.0% | 96.8% |
| 5061156 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.51 | 43.0 | 3.97e-01 | 94.5% | 85.0% |
D4
medium
residues 884-982