←Back to structures
major_coat_protein_VP1
Euk-Viradeno-associated_virus_2
major_coat_protein_VP1__YP_680426__adeno-associated_virus_2__10804
Identity
- Accession:
- YP_680426 ↗
- Protein ID:
- major_coat_protein_VP1
- Kingdom:
- euk
Quality
68.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
adeno-associated_virus_2
TaxID: 10804
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 67-129
D2
high
residues 231-424_611-658_670-688
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 304.1 | 2.60e-90 | 75.9% | 41.7% |
| PF00740.24 | VP1_2 | 91.3 | 7.70e-26 | 26.4% | 13.1% |
D3
medium
residues 429-497
Domain cluster:
rep: capsid_protein__YP_077178__Adeno-associated_virus_-_7__202812__D428-485
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 95.6 | 3.80e-27 | 100.0% | 12.8% |
D4
medium
residues 498-581_599-610