matrix

Euk-Vir

Mosqueiro_virus

matrix__YP_009361967__Mosqueiro_virus__200403

Identity

77.1 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Hapavirus› Mosqueiro_virus

TaxID: 200403

View cluster (29 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 63-126

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06326.19 best	Vesiculo_matrix	58.5	1.20e-15	100.0%	30.3%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2co9A00	1.10.30.10	Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain	0.51	36.0	3.16e-01	76.6%	74.5%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3563012	142.1.1.22 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SCAF11-like_C	0.65	46.0	4.33e-01	75.0%	61.3%

D2 medium residues 127-222

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06326.19 best	Vesiculo_matrix	81.7	1.00e-22	100.0%	45.7%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2w2sA00	3.10.460.20	Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2	0.79	70.0	5.79e-01	100.0%	55.8%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5044379	2004.1.1.19 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras	0.55	42.0	3.52e-01	84.4%	85.6%
3406040	2004.1.1.19 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras	0.52	41.0	3.42e-01	88.5%	81.6%