matrix

Euk-Vir

Sena_Madureira_virus

matrix__YP_009362107__Sena_Madureira_virus__1272957

Identity

70.5 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Sripuvirus› Sena_Madureira_virus

TaxID: 1272957

View cluster (89 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 33-72_86-98

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3gqcC04	3.30.1490.100	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain	0.69	54.0	4.17e-01	86.8%	84.2%
3u3lC00	3.40.33.10	Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP	0.63	52.0	3.52e-01	100.0%	35.7%
1u7lA03	3.30.70.100	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.59	46.0	3.91e-01	96.2%	51.1%
2gjhA00	3.30.1070.20	Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A ›	0.55	38.0	3.71e-01	71.7%	73.7%
1azsA00	3.30.70.1230	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain	0.51	38.0	2.76e-01	88.7%	62.1%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4999840	304.3.1.1 ↗	a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA	0.61	43.0	4.64e-01	90.6%	86.7%
3509575	2003.1.5.42 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21	0.58	42.0	2.69e-01	77.4%	68.1%
3379093	304.3.1.0 ↗	a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain	0.53	43.0	3.93e-01	88.7%	67.1%
3658995	2003.1.2.10 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA	0.53	38.0	2.60e-01	77.4%	85.5%
3703947	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.52	40.0	3.19e-01	86.8%	73.9%
3240279	376.1.1.20 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX	0.52	37.0	3.14e-01	75.5%	62.4%
3322497	304.8.1.45 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant	0.51	42.0	3.76e-01	96.2%	63.7%
3687675	304.11.1.2 ↗	a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › SAT	0.50	36.0	3.38e-01	79.2%	97.1%

D2 medium residues 73-85_99-192

PDB

Domain cluster: rep: matrix__YP_009362270__Chaco_virus__1158189__D100-190