←Back to structures
matrix_protein_M
Euk-VirCoastal_Plains_virus
matrix_protein_M__YP_009094407__Coastal_Plains_virus__764599
Identity
- Accession:
- YP_009094407 ↗
- Protein ID:
- matrix_protein_M
- Kingdom:
- euk
Quality
77.0
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Tibrovirus›
Coastal_Plains_virus
TaxID: 764599
Cluster
View cluster (89 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 66-235
Domain cluster:
rep: matrix__YP_010087311__Muir_Springs_virus__932700__D68-219
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06326.19 best | Vesiculo_matrix | 113.9 | 1.30e-32 | 95.9% | 72.6% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w2sA00 | 3.10.460.20 | Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 | 0.84 | 73.0 | 7.45e-01 | 98.2% | 93.9% |
| 1lg7A00 | 3.10.460.10 | Alpha Beta › Roll › VSV matrix protein › VSV matrix protein | 0.84 | 76.0 | 7.74e-01 | 99.4% | 97.6% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.66 | 27.0 | 3.11e-01 | 71.2% | 50.4% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 33.0 | 3.89e-01 | 71.2% | 87.4% |
| 4illB01 | 2.40.30.310 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 37.0 | 4.31e-01 | 70.6% | 100.0% |
| 4fprB00 | 3.30.70.2910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 39.0 | 4.37e-01 | 98.2% | 97.7% |
| 5a2fA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 33.0 | 3.83e-01 | 71.8% | 88.4% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 30.0 | 3.88e-01 | 70.0% | 100.0% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.54 | 31.0 | 3.95e-01 | 92.9% | 100.0% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 33.0 | 3.85e-01 | 70.0% | 90.2% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.52 | 37.0 | 3.15e-01 | 71.2% | 95.0% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 29.0 | 3.71e-01 | 92.9% | 100.0% |
| 1hw7A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.51 | 40.0 | 4.06e-01 | 81.8% | 92.5% |
| 4gafB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 30.0 | 3.47e-01 | 70.6% | 82.7% |
| 3qw9B00 | 2.60.40.4100 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain | 0.51 | 35.0 | 3.61e-01 | 71.2% | 83.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184954 | 845.1.1.0 ↗ | a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein | 0.84 | 73.0 | 7.45e-01 | 98.2% | 93.9% |
| 2966642 | 845.1.1.2 ↗ | a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein › Vesiculo_matrix | 0.83 | 78.0 | 7.54e-01 | 100.0% | 88.9% |
| 169957 | 845.1.1.0 ↗ | a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein | 0.83 | 77.0 | 7.52e-01 | 100.0% | 90.8% |
| 4255187 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.71 | 29.0 | 3.64e-01 | 71.8% | 60.9% |
| 3322115 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.68 | 28.0 | 3.45e-01 | 71.8% | 58.3% |
| 4155789 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.68 | 27.0 | 3.22e-01 | 70.0% | 53.3% |
| 4153628 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.68 | 27.0 | 3.36e-01 | 70.0% | 58.2% |
| 4149478 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.67 | 27.0 | 3.20e-01 | 70.0% | 53.3% |
| 4316087 | 230.2.1.0 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C | 0.59 | 28.0 | 3.41e-01 | 71.8% | 66.7% |
| 3970088 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 32.0 | 3.98e-01 | 70.0% | 94.7% |
| 3603456 | 304.8.1.82 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 | 0.55 | 30.0 | 3.84e-01 | 71.8% | 95.6% |
| 4008366 | 812.1.1.0 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain | 0.54 | 28.0 | 3.60e-01 | 77.1% | 90.0% |
| 4635990 | 230.2.1.0 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C | 0.54 | 26.0 | 3.16e-01 | 70.0% | 68.7% |
| 3861272 | 304.47.1.5 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › PF29544 | 0.54 | 34.0 | 4.09e-01 | 70.0% | 98.2% |
| 3471357 | 304.133.1.0 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein | 0.54 | 32.0 | 3.71e-01 | 72.4% | 82.5% |
| 3442608 | 304.20.1.1 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind | 0.52 | 40.0 | 4.35e-01 | 80.0% | 98.6% |
| 4447154 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.52 | 29.0 | 3.72e-01 | 70.6% | 100.0% |
| 5048918 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 25.0 | 2.90e-01 | 72.9% | 64.1% |