matrix_protein

Euk-Vir

Tuhoko_virus_2

matrix_protein__YP_009094064__Tuhoko_virus_2__798073

Identity

84.5 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Pararubulavirus› Tuhoko_virus_2

TaxID: 798073

View cluster (63 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-17_187-337

PDB

Domain cluster: rep: M__YP_009508513__Antarctic_penguin_virus_B__2006073__D6-17_185-340

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23765.2 best	Matrix_Paramyxo_C	142.6	1.20e-41	90.8%	90.6%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4g1gA02	2.70.20.60	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, C-terminal domain	0.96	84.0	8.29e-01	90.2%	85.8%
1h2cA00	2.70.20.20	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain	0.65	46.0	5.22e-01	82.8%	95.2%
4g1lA01	2.70.20.50	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain	0.60	46.0	4.63e-01	100.0%	79.1%
3b82A06	3.30.70.240	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.55	29.0	3.36e-01	83.4%	68.6%
1t4aA00	3.30.1280.10	Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS	0.54	28.0	3.69e-01	82.8%	98.7%
3c5iD01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.52	24.0	3.33e-01	82.2%	89.5%
1ex0A03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	31.0	3.62e-01	100.0%	83.3%
1egjA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	27.0	3.36e-01	100.0%	80.2%
6grsA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	28.0	3.61e-01	92.6%	90.5%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1155590	54.1.1.6 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C	0.96	86.0	7.88e-01	92.6%	75.3%
2887044	54.1.1.6 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C	0.92	66.0	6.74e-01	92.6%	75.3%
2321027	54.1.1.6 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C	0.90	70.0	6.97e-01	92.6%	77.4%
863407	54.1.1.1 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix	0.60	45.0	4.70e-01	100.0%	83.7%
2887049	54.1.1.1 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix	0.58	39.0	4.55e-01	93.9%	98.2%
3999465	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.53	33.0	3.57e-01	100.0%	73.9%
3679719	304.147.1.0 ↗	a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain	0.52	24.0	3.50e-01	95.1%	100.0%
4973171	211.1.1.0 ↗	a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	0.52	20.0	3.13e-01	77.3%	91.7%

D2 high residues 28-185

PDB

Domain cluster: rep: matrix_protein__YP_009094039__Pneumovirus_dog_Bari_100-12_ITA_2012__2482952__D2-120

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00661.29 best	Matrix_Paramyxo_N	157.7	2.60e-46	99.4%	85.2%