matrix_protein

Euk-Vir

Scophthalmus_maximus_rhabdovirus

matrix_protein__YP_009094344__Scophthalmus_maximus_rhabdovirus__936149

Identity

72.7 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Scophrhavirus› Scophthalmus_maximus_rhabdovirus

TaxID: 936149

View cluster (29 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 89-207

PDB

Domain cluster: rep: matrix__YP_009361967__Mosqueiro_virus__200403__D127-222

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06326.19 best	Vesiculo_matrix	41.4	2.20e-10	99.2%	55.8%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2w2sA00	3.10.460.20	Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2	0.77	68.0	6.03e-01	100.0%	68.1%
1lg7A00	3.10.460.10	Alpha Beta › Roll › VSV matrix protein › VSV matrix protein	0.75	68.0	6.02e-01	100.0%	70.7%
3regA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.51	35.0	3.17e-01	71.4%	91.2%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3666379	2004.1.1.548 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras, Roc	0.53	37.0	3.08e-01	70.6%	92.6%
5044379	2004.1.1.19 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras	0.52	37.0	3.27e-01	72.3%	82.8%
3264025	207.1.1.142 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8	0.51	37.0	2.45e-01	76.5%	33.9%