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matrix_protein
Euk-VirBorna_disease_virus_2
matrix_protein__YP_009268920__Borna_disease_virus_2__1714622
Identity
- Accession:
- YP_009268920 ↗
- Protein ID:
- matrix_protein
- Kingdom:
- euk
Quality
83.1
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Bornaviridae›
Orthobornavirus›
Borna_disease_virus_2
TaxID: 1714622
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-128
Domain cluster:
rep: hypothetical_protein_KM513_gp5__YP_010085029__Wuhan_sharpbelly_bornavirus__2116489__D21-123
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16520.12 best | Matrix_Borna | 229.8 | 4.90e-69 | 85.1% | 100.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f1jA00 | 2.70.20.40 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Borna disease virus, matrix protein | 0.94 | 92.0 | 8.63e-01 | 100.0% | 86.4% |
| 1m0wA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 26.0 | 2.78e-01 | 92.6% | 43.5% |
| 3al9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 42.0 | 2.80e-01 | 79.3% | 24.5% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 34.0 | 3.92e-01 | 95.0% | 87.2% |
| 5u3fB01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.53 | 39.0 | 3.80e-01 | 77.7% | 95.7% |
| 4da5A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 33.0 | 3.77e-01 | 70.2% | 90.4% |
| 3a35A02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 37.0 | 4.19e-01 | 94.2% | 98.9% |
| 1nw1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 35.0 | 3.86e-01 | 71.1% | 93.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1109145 | 54.1.1.4 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › BDV_M | 0.97 | 90.0 | 8.60e-01 | 100.0% | 85.3% |
| 863407 | 54.1.1.1 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix | 0.62 | 53.0 | 4.87e-01 | 92.6% | 74.5% |
| 3737480 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.61 | 34.0 | 2.25e-01 | 72.7% | 12.6% |
| 3992265 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 30.0 | 3.64e-01 | 92.6% | 72.0% |
| 5003677 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 33.0 | 4.12e-01 | 83.5% | 100.0% |
| 5033505 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 30.0 | 3.10e-01 | 89.3% | 58.2% |
| 4960285 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 42.0 | 4.37e-01 | 92.6% | 94.8% |
| 4029739 | 9.8.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain › CathepsinC_exc | 0.52 | 34.0 | 3.45e-01 | 83.5% | 66.7% |
| 4930521 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 42.0 | 4.36e-01 | 92.6% | 94.8% |
| 3933225 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.51 | 36.0 | 2.50e-01 | 71.1% | 28.9% |
| 3631136 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.51 | 43.0 | 3.48e-01 | 91.7% | 96.2% |
| 4960437 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.51 | 43.0 | 4.33e-01 | 92.6% | 92.5% |
| None | — | 0.50 | 35.0 | 2.46e-01 | 70.2% | 31.7% |