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matrix_protein

Euk-Vir

Gata_virus

matrix_protein__YP_009315880__Gata_virus__1911435

Identity

Accession:
YP_009315880 ↗
Protein ID:
matrix_protein
Kingdom:
euk

Quality

76.0 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Alphapaprhavirus› Gata_virus

TaxID: 1911435

Cluster

View cluster (29 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-202
PDB
Domain cluster: rep: matrix__YP_010087311__Muir_Springs_virus__932700__D68-219
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06326.19 best Vesiculo_matrix 96.8 2.40e-27 96.7% 68.8%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lg7A00 3.10.460.10 Alpha Beta › Roll › VSV matrix protein › VSV matrix protein 0.79 75.0 7.29e-01 100.0% 97.6%
2w2sA00 3.10.460.20 Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 0.76 72.0 6.99e-01 100.0% 93.3%
2vqeC02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.63 28.0 3.41e-01 74.7% 63.0%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.55 35.0 4.03e-01 70.7% 88.0%
2nyiA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 33.0 4.03e-01 76.0% 98.9%
1cqmA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.54 35.0 4.13e-01 78.0% 100.0%
3mgjA00 3.30.70.2690 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain 0.53 34.0 4.05e-01 78.7% 100.0%
4gafB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 33.0 3.64e-01 76.7% 81.8%
3luyA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 30.0 3.79e-01 72.0% 96.6%
1f3vA00 3.30.70.680 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TRADD, N-terminal domain 0.52 45.0 4.50e-01 96.7% 95.6%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.52 35.0 3.88e-01 71.3% 87.4%
1hw7A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.51 44.0 4.19e-01 93.3% 91.9%
2wz1B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.50 39.0 3.63e-01 83.3% 64.8%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2966642 845.1.1.2 ↗ a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein › Vesiculo_matrix 0.82 78.0 7.15e-01 100.0% 88.9%
169957 845.1.1.0 ↗ a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein 0.82 77.0 7.14e-01 100.0% 90.8%
184954 845.1.1.0 ↗ a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein 0.76 72.0 6.99e-01 100.0% 93.3%
3322115 230.2.1.1 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.64 30.0 3.38e-01 76.7% 57.4%
4155789 230.2.1.1 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.61 28.0 3.13e-01 75.3% 53.3%
3249540 230.2.1.1 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.61 28.0 3.28e-01 76.0% 59.1%
4946247 304.57.1.0 ↗ a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like 0.59 40.0 4.70e-01 77.3% 100.0%
4219210 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 41.0 4.64e-01 77.3% 99.1%
4936039 304.51.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related 0.58 41.0 4.62e-01 77.3% 99.1%
3970088 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 35.0 4.15e-01 77.3% 93.7%
4605207 304.57.1.0 ↗ a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like 0.57 40.0 4.48e-01 76.7% 93.9%
3603456 304.8.1.82 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 0.55 32.0 4.02e-01 76.7% 95.6%
3623510 304.25.1.0 ↗ a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.55 37.0 4.34e-01 74.0% 98.1%
4316087 230.2.1.0 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C 0.55 30.0 3.34e-01 76.0% 66.7%
4002543 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 34.0 3.95e-01 74.7% 87.6%
3523036 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.55 34.0 3.82e-01 76.0% 82.7%
3471357 304.133.1.0 ↗ a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein 0.54 36.0 3.89e-01 76.7% 82.5%
4317100 230.2.1.2 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 0.54 29.0 3.33e-01 74.7% 68.7%
4067682 848.1.1.1 ↗ a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 0.52 44.0 3.87e-01 92.0% 70.2%
4883824 304.124.1.6 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF5072 0.52 36.0 3.91e-01 72.0% 86.8%
4194439 848.1.1.1 ↗ a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 0.52 43.0 3.77e-01 90.7% 67.7%
5372 304.49.1.1 ↗ a+b two layers › Alpha-beta plaits › TRADD, N-terminal domain/Dystroglycan, domain 2 › TRADD, N-terminal domain/Dystroglycan, domain 2 › TRADD_N 0.52 45.0 4.50e-01 96.7% 95.6%
4941817 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 35.0 4.01e-01 72.7% 97.2%
3586038 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.50 33.0 3.39e-01 76.7% 67.6%
3842648 11.1.1.586 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERE_Ig-like 0.50 34.0 3.59e-01 76.0% 77.0%