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matrix_protein
Euk-VirSimian_Agent_10
matrix_protein__YP_009505438__Simian_Agent_10__929831
Identity
- Accession:
- YP_009505438 ↗
- Protein ID:
- matrix_protein
- Kingdom:
- euk
Quality
84.7
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Respirovirus›
Simian_Agent_10
TaxID: 929831
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-18_183-329
Domain cluster:
rep: M__YP_009508513__Antarctic_penguin_virus_B__2006073__D6-17_185-340
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23765.2 best | Matrix_Paramyxo_C | 200.4 | 2.10e-59 | 89.9% | 89.9% |
D2
high
residues 36-68_82-181
Domain cluster:
rep: matrix_protein__YP_009094039__Pneumovirus_dog_Bari_100-12_ITA_2012__2482952__D2-120
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00661.29 best | Matrix_Paramyxo_N | 130.3 | 7.10e-38 | 100.0% | 80.2% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g1lA01 | 2.70.20.50 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain | 0.91 | 86.0 | 7.93e-01 | 100.0% | 80.4% |
| 2vqpA01 | 2.70.20.30 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › HRSV-S2 matrix protein, N-terminal domain | 0.83 | 71.0 | 7.45e-01 | 100.0% | 99.2% |
| 1h2cA00 | 2.70.20.20 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain | 0.75 | 62.0 | 6.43e-01 | 87.2% | 95.2% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.62 | 31.0 | 3.34e-01 | 85.7% | 55.0% |
| 3f1jA00 | 2.70.20.40 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Borna disease virus, matrix protein | 0.59 | 49.0 | 4.88e-01 | 94.7% | 87.1% |
| 4g1gA02 | 2.70.20.60 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, C-terminal domain | 0.58 | 49.0 | 4.60e-01 | 94.0% | 81.1% |
| 2yjlA00 | 2.60.40.2990 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 29.0 | 3.21e-01 | 97.7% | 60.2% |
| 4csbA00 | 2.40.128.480 | Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein | 0.55 | 35.0 | 3.79e-01 | 84.2% | 74.3% |
| 2vfkA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.53 | 42.0 | 3.71e-01 | 87.2% | 89.8% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 32.0 | 3.48e-01 | 81.2% | 75.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2887049 | 54.1.1.1 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix | 0.95 | 77.0 | 8.48e-01 | 88.7% | 99.1% |
| 863407 | 54.1.1.1 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix | 0.90 | 85.0 | 7.99e-01 | 100.0% | 85.0% |
| 1503359 | 54.1.1.2 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Pneumo_matrix | 0.84 | 72.0 | 7.37e-01 | 100.0% | 93.8% |
| 3056890 | 54.1.1.3 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › VP40 | 0.62 | 56.0 | 5.37e-01 | 100.0% | 89.5% |
| 2321027 | 54.1.1.6 ↗ | beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C | 0.61 | 49.0 | 4.56e-01 | 94.0% | 69.0% |
| 4960285 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.59 | 47.0 | 4.99e-01 | 93.2% | 97.4% |
| 3955687 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.59 | 47.0 | 4.37e-01 | 85.0% | 95.2% |
| 3962197 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.58 | 46.0 | 4.31e-01 | 85.0% | 92.9% |
| 5012930 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 25.0 | 3.02e-01 | 84.2% | 61.2% |
| 3253597 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.55 | 44.0 | 3.93e-01 | 85.7% | 96.4% |
| 3279295 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 27.0 | 3.11e-01 | 86.5% | 70.0% |