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matrix_protein
Euk-VirDrosophila_immigrans_sigmavirus
matrix_protein__YP_009505495__Drosophila_immigrans_sigmavirus__1002360
Identity
- Accession:
- YP_009505495 ↗
- Protein ID:
- matrix_protein
- Kingdom:
- euk
Quality
70.9
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Sigmavirus›
Drosophila_immigrans_sigmavirus
TaxID: 1002360
Cluster
View cluster (89 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 62-219
Domain cluster:
rep: matrix__YP_010087311__Muir_Springs_virus__932700__D68-219
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06326.19 best | Vesiculo_matrix | 87.2 | 2.10e-24 | 100.0% | 73.6% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lg7A00 | 3.10.460.10 | Alpha Beta › Roll › VSV matrix protein › VSV matrix protein | 0.85 | 78.0 | 7.75e-01 | 100.0% | 93.3% |
| 2w2sA00 | 3.10.460.20 | Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 | 0.81 | 72.0 | 7.11e-01 | 100.0% | 90.2% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.67 | 28.0 | 3.14e-01 | 71.5% | 48.1% |
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.55 | 28.0 | 3.83e-01 | 72.2% | 97.4% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.54 | 38.0 | 3.97e-01 | 70.3% | 86.7% |
| 6zxbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 37.0 | 3.83e-01 | 75.3% | 75.7% |
| 1azsA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.53 | 37.0 | 3.55e-01 | 99.4% | 60.0% |
| 1f3vA00 | 3.30.70.680 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TRADD, N-terminal domain | 0.52 | 44.0 | 4.47e-01 | 92.4% | 93.0% |
| 2wz1B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 38.0 | 3.57e-01 | 98.7% | 61.2% |
| 7altB01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.62e-01 | 72.2% | 98.1% |
| 3r5gA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 38.0 | 3.55e-01 | 99.4% | 62.6% |
| 1hw7A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.50 | 41.0 | 3.98e-01 | 86.1% | 91.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2966642 | 845.1.1.2 ↗ | a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein › Vesiculo_matrix | 0.85 | 81.0 | 7.55e-01 | 100.0% | 83.6% |
| 169957 | 845.1.1.0 ↗ | a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein | 0.84 | 80.0 | 7.55e-01 | 100.0% | 86.4% |
| 184954 | 845.1.1.0 ↗ | a+b complex topology › VSV matrix protein › VSV matrix protein › VSV matrix protein | 0.81 | 72.0 | 7.11e-01 | 100.0% | 90.2% |
| 3322115 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.67 | 28.0 | 3.32e-01 | 71.5% | 54.8% |
| 4936039 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.60 | 39.0 | 4.57e-01 | 70.9% | 94.5% |
| 4219210 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 39.0 | 4.57e-01 | 70.9% | 94.5% |
| 4946247 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.60 | 39.0 | 4.65e-01 | 70.9% | 99.0% |
| 4605207 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.59 | 39.0 | 4.48e-01 | 70.9% | 91.3% |
| 3955398 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.55 | 37.0 | 4.35e-01 | 70.9% | 99.1% |
| 5054179 | 304.42.1.1 ↗ | a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC › MoaC | 0.54 | 38.0 | 3.98e-01 | 72.8% | 91.0% |
| 3893621 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 33.0 | 3.64e-01 | 70.3% | 81.7% |
| 3902600 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.51 | 31.0 | 3.74e-01 | 72.2% | 95.0% |
| 4300225 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 35.0 | 3.71e-01 | 70.9% | 99.3% |