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membrane-associated_glycoprotein_precursor
Euk-VirLangat_virus
membrane-associated_glycoprotein_precursor__NP_740294__Langat_virus__11085
Identity
- Accession:
- NP_740294 ↗
- Protein ID:
- membrane-associated_glycoprotein_precursor
- Kingdom:
- euk
Quality
77.8
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Orthoflavivirus›
Langat_virus
TaxID: 11085
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-79
Domain cluster:
rep: propep__YP_009553725__Kampung_Karu_virus__2045186__D2-68
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01570.23 best | Flavi_propep | 57.7 | 1.40e-15 | 96.2% | 65.9% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c5xC00 | 2.60.260.50 | Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Flavivirus polyprotein propeptide domain | 0.86 | 80.0 | 7.89e-01 | 100.0% | 98.8% |
| 6y2kA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 33.0 | 3.93e-01 | 92.3% | 86.0% |
| 3wy2A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 37.0 | 3.87e-01 | 91.0% | 83.6% |
| 3picA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 40.0 | 2.61e-01 | 87.2% | 31.5% |
| 5e6sB02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.50 | 44.0 | 3.61e-01 | 100.0% | 74.3% |
| 4djmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 32.0 | 3.24e-01 | 89.7% | 62.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2410038 | 67.1.1.2 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep | 0.94 | 89.0 | 8.81e-01 | 100.0% | 96.2% |
| 2721993 | 67.1.1.2 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep | 0.91 | 81.0 | 8.15e-01 | 97.4% | 94.8% |
| 2720279 | 67.1.1.2 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep | 0.91 | 85.0 | 7.71e-01 | 100.0% | 80.2% |
| 4301634 | 11.1.1.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C | 0.51 | 33.0 | 3.29e-01 | 91.0% | 62.5% |
| 4180426 | 11.1.1.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C | 0.51 | 32.0 | 3.21e-01 | 91.0% | 58.8% |
| 3628520 | 5.1.4.308 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, LLGL | 0.51 | 40.0 | 2.34e-01 | 91.0% | 94.6% |
D2
high
residues 112-163
Domain cluster:
rep: PreM_protein__NP_775514__Powassan_virus__11083__D116-166
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01004.25 best | Flavi_M | 30.1 | 4.30e-07 | 100.0% | 66.2% |