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membrane-associated_protein

Euk-Vir

Marburg_marburgvirus

membrane-associated_protein__YP_009055227__Marburg_marburgvirus__11269

Identity

Accession:: YP_009055227 ↗
Protein ID:: membrane-associated_protein
Kingdom:: euk

Quality

76.1 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Filoviridae› Orthomarburgvirus› Orthomarburgvirus_marburgense

TaxID: 11269

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-165

PDB

Domain cluster: rep: membrane-associated_protein__YP_009513281__Bombali_ebolavirus__2010960__D21-50_89-158

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06389.17 best	Filo_VP24	267.9	1.40e-79	100.0%	53.8%

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vp7A00	1.10.287.1040	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit	0.76	28.0	4.08e-01	75.9%	72.1%
3llkA01	1.20.120.1960	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain	0.62	37.0	4.33e-01	89.4%	83.7%
2nn4A00	1.10.287.760	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like	0.62	29.0	4.18e-01	75.9%	100.0%
2k19A00	1.20.1440.140	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.60	34.0	3.98e-01	78.0%	78.6%
1q6aA00	1.10.1240.30	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain	0.60	29.0	3.31e-01	91.5%	61.7%
2rldA00	1.20.1440.60	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence	0.55	38.0	4.16e-01	89.4%	86.0%
2pusA04	6.10.140.300	Special › Helix non-globular › Helix Hairpins ›	0.52	30.0	3.42e-01	87.2%	73.1%
3h5aD01	3.90.930.70	Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 ›	0.52	29.0	3.59e-01	86.5%	87.5%
3i2fA02	1.10.3020.10	Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain)	0.52	32.0	3.88e-01	83.0%	92.6%
2qywA00	1.20.58.400	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins	0.52	29.0	3.47e-01	76.6%	81.1%
1uurA01	1.20.58.240	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1	0.51	32.0	3.60e-01	76.6%	80.0%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1148074	3400.1.1.1 ↗	a+b complex topology › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Filo_VP24	0.89	86.0	7.15e-01	100.0%	63.5%
185604	3400.1.1.1 ↗	a+b complex topology › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Filo_VP24	0.87	80.0	6.73e-01	100.0%	61.9%
4933354	3755.3.1.637 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121	0.79	29.0	2.35e-01	75.2%	20.4%
3502356	4163.1.1.1 ↗	alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5	0.58	34.0	3.35e-01	76.6%	52.9%
2983210	6004.1.1.2 ↗	extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5	0.57	35.0	3.83e-01	91.5%	72.9%
4976912	601.28.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like	0.56	30.0	3.82e-01	78.0%	87.1%
2755028	6004.1.1.2 ↗	extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5	0.55	35.0	3.80e-01	91.5%	76.5%
4823831	6004.1.1.2 ↗	extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5	0.54	32.0	3.68e-01	88.7%	77.8%
3308836	5059.1.1.34 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA, Nuc_sug_transp	0.53	39.0	3.07e-01	76.6%	63.5%
5072210	601.28.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like	0.53	30.0	3.62e-01	78.7%	89.4%
3407706	206.1.1.55 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL	0.52	38.0	2.70e-01	97.9%	25.9%
3629201	3065.1.1.0 ↗	alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins	0.50	43.0	4.44e-01	90.8%	100.0%

D2 high residues 170-252

PDB

Domain cluster: rep: matrix_protein__YP_001531158__Marburg_marburgvirus__11269__D178-252

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06389.17 best	Filo_VP24	143.3	1.40e-41	100.0%	34.0%