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membrane_glycoprotein_polyprotein

Euk-Vir

Mermet_virus

membrane_glycoprotein_polyprotein__YP_009666921__Mermet_virus__159147

Identity

Accession:: YP_009666921 ↗
Protein ID:: membrane_glycoprotein_polyprotein
Kingdom:: euk

Quality

75.8 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Peribunyaviridae› Orthobunyavirus› Mermet_virus

TaxID: 159147

Cluster

View cluster (42 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 200-331

PDB

Domain cluster: rep: polyprotein__YP_009666976__San_Angelo_virus__45767__D199-326

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03563.19 best	Bunya_G2	157.6	5.70e-46	81.8%	38.1%

D2 high residues 353-425_452-475

PDB

Domain cluster: rep: polyprotein__YP_009666942__Enseada_virus__1821545__D351-432_453-478

D3 high residues 837-910

PDB

Domain cluster: rep: polyprotein__YP_008709777__Murrumbidgee_virus__1406134__D787-850

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	54.2	1.20e-14	100.0%	8.3%

D4 high residues 1364-1422

PDB

D5 medium residues 481-589_658-734

PDB

Domain cluster: representative

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2504457	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.86	72.0	6.69e-01	85.5%	100.0%
2504456	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.83	76.0	6.81e-01	95.2%	100.0%
2504455	7069.1.1.1 ↗	alpha complex topology › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Head domain of SBV glycoprotein Gc › Bunya_G1	0.82	74.0	6.70e-01	93.5%	100.0%
3709913	611.3.1.0 ↗	alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	0.52	30.0	3.36e-01	70.4%	71.7%

D6 medium residues 590-657_1028-1072

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	45.3	5.90e-12	58.4%	7.6%
PF03557.22	Bunya_G1	95.7	3.50e-27	54.9%	7.0%

D7 medium residues 735-823

PDB

Domain cluster: rep: polyprotein__YP_009117085__Maprik_virus__1590836__D700-782

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	51.1	1.10e-13	100.0%	10.3%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2qdeA01	3.30.390.10	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain	0.57	45.0	3.96e-01	85.4%	100.0%
4h4nA00	2.60.40.3750	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.56	34.0	3.91e-01	98.9%	85.5%
4j3vA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.56	38.0	3.66e-01	98.9%	61.0%
1xovA03	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.55	37.0	4.09e-01	76.4%	87.5%
2g2nC00	2.60.40.180	Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain	0.53	36.0	3.40e-01	98.9%	56.2%
3fvqA03	2.40.50.470	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.53	28.0	3.28e-01	73.0%	74.1%
2wanA03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	36.0	3.52e-01	98.9%	63.7%
4ry2A01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.52	36.0	3.15e-01	100.0%	46.1%
3p06A00	3.30.230.110	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 ›	0.51	42.0	3.38e-01	94.4%	99.5%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3967986	4.7.1.2 ↗	beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF	0.59	38.0	4.01e-01	70.8%	72.5%
3997517	220.1.1.1 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › PH	0.55	33.0	3.62e-01	84.3%	74.3%
3212583	76.1.1.0 ↗	beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I	0.53	38.0	3.66e-01	91.0%	66.0%
4305615	2004.1.1.414 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1	0.53	42.0	2.79e-01	86.5%	23.2%
5066724	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.53	42.0	4.05e-01	87.6%	75.2%
3596775	11.2.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain	0.52	38.0	3.34e-01	96.6%	51.9%
5044263	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.51	37.0	4.10e-01	76.4%	97.1%
4318744	2003.1.1.0 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains	0.51	36.0	2.45e-01	74.2%	53.7%

D8 medium residues 911-971

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	61.4	7.60e-17	100.0%	6.8%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3gpiA00	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.59	40.0	2.62e-01	70.5%	68.5%
3cu2A00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.58	40.0	2.76e-01	73.8%	99.6%
1z0sA01	3.40.50.10330	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1	0.55	37.0	3.05e-01	70.5%	91.9%
3alfA01	3.20.20.80	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases	0.54	36.0	2.44e-01	72.1%	57.6%
3gqwB01	3.40.50.12780	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain	0.51	42.0	2.61e-01	100.0%	99.5%
4yapA01	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.50	35.0	2.93e-01	77.0%	99.2%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4651264	217.1.1.1 ↗	a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5	0.65	45.0	3.28e-01	73.8%	70.6%
4961681	217.1.1.1 ↗	a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5	0.64	43.0	3.16e-01	70.5%	70.6%
3962951	217.1.1.0 ↗	a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain	0.62	43.0	3.10e-01	72.1%	69.1%
3607094	2002.4.1.1 ↗	a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase	0.57	39.0	2.62e-01	70.5%	34.2%
5078485	2003.1.14.2 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N	0.57	40.0	2.95e-01	75.4%	72.6%
3456707	207.1.1.95 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14	0.53	38.0	2.76e-01	77.0%	87.2%
3742866	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.53	36.0	3.14e-01	73.8%	51.4%
5043452	2002.1.1.0 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels	0.52	36.0	2.46e-01	73.8%	63.2%
5064221	7522.1.1.0 ↗	a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like	0.52	43.0	3.07e-01	88.5%	43.0%
1192680	7577.1.1.3 ↗	a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5	0.52	36.0	2.51e-01	77.0%	57.5%
5004927	2007.1.1.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like	0.51	34.0	2.55e-01	70.5%	78.4%

D9 medium residues 972-1010_1096-1135_1230-1243

PDB

Domain cluster: rep: polyprotein__YP_009666984__Potosi_virus__273360__D951-1029_1099-1130

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	32.4	4.60e-08	51.6%	4.3%
PF03557.22	Bunya_G1	31.0	1.20e-07	45.2%	4.5%

D10 medium residues 1244-1356

PDB

Domain cluster: rep: glycoprotein_precursor__YP_009664619__Gouleako_virus__603003__D815-896

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03557.22 best	Bunya_G1	117.1	1.10e-33	100.0%	13.2%