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membrane_glycoprotein_precursor_prM
Euk-VirLammi_virus
membrane_glycoprotein_precursor_prM__YP_009268585__Lammi_virus__649187
Identity
- Accession:
- YP_009268585 ↗
- Protein ID:
- membrane_glycoprotein_precursor_prM
- Kingdom:
- euk
Quality
74.9
mean pLDDT
Taxonomy
TaxID: 649187
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-81
Domain cluster:
rep: propep__YP_009553725__Kampung_Karu_virus__2045186__D2-68
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01570.23 best | Flavi_propep | 86.1 | 1.90e-24 | 95.0% | 87.5% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c5xC00 | 2.60.260.50 | Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Flavivirus polyprotein propeptide domain | 0.92 | 86.0 | 8.57e-01 | 100.0% | 97.5% |
| 4bdxA00 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.63 | 32.0 | 3.18e-01 | 88.7% | 44.6% |
| 2cg7A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.60 | 32.0 | 3.90e-01 | 87.5% | 87.0% |
| 2wj6A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 41.0 | 3.09e-01 | 73.8% | 44.1% |
| 3w5mA06 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.54 | 41.0 | 3.84e-01 | 82.5% | 97.0% |
| 6gszA05 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.53 | 39.0 | 3.91e-01 | 96.2% | 76.8% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2720279 | 67.1.1.2 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep | 0.95 | 90.0 | 8.22e-01 | 100.0% | 79.2% |
| 2721993 | 67.1.1.2 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep | 0.94 | 82.0 | 8.44e-01 | 97.5% | 94.8% |
| 2410038 | 67.1.1.2 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › Flavi_propep | 0.91 | 83.0 | 8.34e-01 | 100.0% | 96.2% |
| 5053224 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 37.0 | 4.05e-01 | 80.0% | 90.0% |
| 3740938 | 223.2.1.34 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 | 0.55 | 40.0 | 3.21e-01 | 76.2% | 53.9% |
| 3168866 | 223.2.1.34 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 | 0.55 | 39.0 | 3.14e-01 | 75.0% | 48.2% |
| 3685389 | 223.2.1.23 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 | 0.53 | 38.0 | 3.01e-01 | 77.5% | 43.8% |
| 3549751 | 223.2.1.23 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 | 0.52 | 38.0 | 2.90e-01 | 77.5% | 44.4% |
| 3890824 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.52 | 38.0 | 3.11e-01 | 78.8% | 68.8% |
| 3930154 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 38.0 | 3.07e-01 | 81.2% | 60.0% |
| 3275859 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.48e-01 | 97.5% | 85.5% |
D2
high
residues 114-168
Domain cluster:
rep: matrix_protein_M__NP_776001__Yellow_fever_virus__11089__D24-74
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01004.25 best | Flavi_M | 52.4 | 4.70e-14 | 98.2% | 67.6% |