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membrane_protein_A21
Euk-VirSaimiriine_betaherpesvirus_4
membrane_protein_A21__YP_004940274__Saimiriine_betaherpesvirus_4__1535247
Identity
- Accession:
- YP_004940274 ↗
- Protein ID:
- membrane_protein_A21
- Kingdom:
- euk
Quality
76.6
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Saimiriine_betaherpesvirus_4
TaxID: 1535247
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-99
Domain cluster:
rep: membrane_glycoprotein_UL144__NP_612758__Panine_betaherpesvirus_2__188763__D28-98
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rsuE01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.78 | 49.0 | 5.60e-01 | 72.7% | 84.7% |
| 1extA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.74 | 46.0 | 5.54e-01 | 80.5% | 96.1% |
| 6faxR01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.71 | 45.0 | 5.45e-01 | 72.7% | 100.0% |
| 2uwiA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.68 | 47.0 | 4.60e-01 | 71.4% | 96.4% |
| 1sg1X01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.67 | 47.0 | 4.70e-01 | 74.0% | 77.8% |
| 3me4B01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.67 | 47.0 | 4.68e-01 | 80.5% | 71.2% |
| 3u3pA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.66 | 49.0 | 4.86e-01 | 79.2% | 74.7% |
| 4mxwS00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.66 | 45.0 | 4.56e-01 | 76.6% | 69.6% |
| 5wjfA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.66 | 47.0 | 4.80e-01 | 94.8% | 77.0% |
| 4kgqD02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.66 | 45.0 | 4.50e-01 | 71.4% | 78.8% |
| 4yn0A02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.65 | 47.0 | 4.57e-01 | 75.3% | 79.5% |
| 1extA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.63 | 46.0 | 4.48e-01 | 79.2% | 70.6% |
| 3mhdD01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.62 | 47.0 | 4.59e-01 | 80.5% | 74.1% |
| 3thmF00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.59 | 47.0 | 4.79e-01 | 93.5% | 84.4% |
| 1sg1X02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.58 | 45.0 | 4.55e-01 | 81.8% | 92.4% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3562673 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.88 | 61.0 | 7.16e-01 | 79.2% | 100.0% |
| 2492302 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.80 | 49.0 | 5.76e-01 | 74.0% | 88.9% |
| 2154073 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.76 | 45.0 | 5.61e-01 | 80.5% | 100.0% |
| 1884975 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.75 | 51.0 | 5.12e-01 | 79.2% | 70.1% |
| 3763206 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.74 | 63.0 | 6.25e-01 | 93.5% | 87.5% |
| 3879535 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.74 | 66.0 | 6.26e-01 | 97.4% | 87.8% |
| 3537811 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.73 | 54.0 | 5.14e-01 | 79.2% | 66.7% |
| 3886488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.73 | 52.0 | 5.05e-01 | 74.0% | 78.8% |
| 3880888 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.73 | 62.0 | 5.88e-01 | 100.0% | 77.8% |
| 3871490 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.71 | 49.0 | 4.88e-01 | 77.9% | 68.8% |
| 1572587 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.71 | 53.0 | 5.03e-01 | 79.2% | 67.4% |
| 3921747 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.71 | 50.0 | 4.96e-01 | 80.5% | 71.2% |
| 3228694 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.70 | 49.0 | 5.51e-01 | 83.1% | 91.7% |
| 3910090 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.70 | 59.0 | 5.06e-01 | 96.1% | 58.3% |
| 3844666 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.70 | 49.0 | 5.14e-01 | 72.7% | 92.9% |
| 3884016 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.69 | 47.0 | 5.30e-01 | 71.4% | 93.3% |
| 4342996 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.69 | 48.0 | 4.78e-01 | 72.7% | 81.2% |
| 3911223 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.68 | 48.0 | 4.66e-01 | 72.7% | 74.1% |
| 3847264 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.68 | 57.0 | 5.30e-01 | 89.6% | 82.1% |
| 3768685 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.67 | 59.0 | 5.47e-01 | 94.8% | 82.1% |
| 3877322 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.67 | 46.0 | 5.12e-01 | 70.1% | 100.0% |
| 2909867 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.67 | 48.0 | 5.05e-01 | 74.0% | 89.9% |
| 3572457 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.67 | 48.0 | 5.08e-01 | 75.3% | 90.0% |
| 3882488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.67 | 45.0 | 4.82e-01 | 70.1% | 94.1% |
| 3885918 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.67 | 49.0 | 5.03e-01 | 76.6% | 92.0% |
| 2410644 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.67 | 49.0 | 5.26e-01 | 77.9% | 89.7% |
| 3868348 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.67 | 54.0 | 5.64e-01 | 85.7% | 100.0% |
| 3347841 | 389.1.3.19 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › RCC1_2 | 0.66 | 53.0 | 3.36e-01 | 85.7% | 17.9% |
| 3876372 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.66 | 46.0 | 4.54e-01 | 71.4% | 78.8% |
| 1184772 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.66 | 46.0 | 4.52e-01 | 71.4% | 77.8% |
| 3898988 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.66 | 46.0 | 4.71e-01 | 80.5% | 76.0% |
| 3526975 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.66 | 58.0 | 4.43e-01 | 97.4% | 50.9% |
| 3759682 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.66 | 45.0 | 4.40e-01 | 71.4% | 75.3% |
| 1184747 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.65 | 49.0 | 4.87e-01 | 80.5% | 76.8% |
| 3562936 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.65 | 44.0 | 4.39e-01 | 70.1% | 77.5% |
| 3756712 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.65 | 55.0 | 4.99e-01 | 93.5% | 81.0% |
| 3482382 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.65 | 48.0 | 4.72e-01 | 80.5% | 78.8% |
| 1184748 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.64 | 46.0 | 4.51e-01 | 74.0% | 78.0% |
| 1759571 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.64 | 44.0 | 4.98e-01 | 76.6% | 96.5% |
| 3853365 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.64 | 56.0 | 5.56e-01 | 94.8% | 95.0% |
| 3900125 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.64 | 49.0 | 4.87e-01 | 80.5% | 91.3% |
| 3556262 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.63 | 47.0 | 4.62e-01 | 79.2% | 74.1% |
| 3539066 | 389.1.3.8 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › RANK_CRD_2 | 0.63 | 45.0 | 4.56e-01 | 80.5% | 77.3% |
| 3901525 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.63 | 50.0 | 4.29e-01 | 83.1% | 56.5% |
| 3887144 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.62 | 45.0 | 4.33e-01 | 80.5% | 65.6% |
| 3524839 | 389.1.3.24 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6, PF27736 | 0.61 | 53.0 | 4.66e-01 | 96.1% | 74.8% |
| 3541402 | 389.1.3.26 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › PF27736 | 0.61 | 53.0 | 5.16e-01 | 94.8% | 97.6% |
| 4377309 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.61 | 48.0 | 4.78e-01 | 83.1% | 95.0% |
| 3910723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.60 | 56.0 | 4.97e-01 | 100.0% | 85.7% |
| 3893236 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.60 | 47.0 | 4.81e-01 | 83.1% | 97.3% |
| 3920102 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.59 | 40.0 | 4.05e-01 | 70.1% | 80.0% |
| 3540238 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.58 | 48.0 | 3.90e-01 | 89.6% | 57.2% |
| 3507723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.58 | 46.0 | 4.57e-01 | 84.4% | 95.0% |
| 3879434 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.52 | 43.0 | 3.97e-01 | 90.9% | 75.0% |