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membrane_protein_ORF25D
Euk-VirCyprinid_herpesvirus_2
membrane_protein_ORF25D__YP_007003847__Cyprinid_herpesvirus_2__317878
Identity
- Accession:
- YP_007003847 ↗
- Protein ID:
- membrane_protein_ORF25D
- Kingdom:
- euk
Quality
50.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_2
TaxID: 317878
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-116
D2
high
residues 129-263
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zuxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 42.0 | 5.13e-01 | 100.0% | 92.0% |
| 3bfoA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 42.0 | 5.29e-01 | 98.5% | 96.5% |
| 3shsA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 44.0 | 5.40e-01 | 98.5% | 97.7% |
| 3b5hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 41.0 | 5.17e-01 | 98.5% | 97.6% |
| 2ensA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 44.0 | 5.24e-01 | 84.4% | 92.6% |
| 3k0wA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 45.0 | 5.34e-01 | 84.4% | 96.7% |
| 3b4nA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 41.0 | 5.05e-01 | 88.9% | 98.9% |
| 2zg2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 41.0 | 4.98e-01 | 100.0% | 98.9% |
| 3s9dD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 44.0 | 5.11e-01 | 87.4% | 100.0% |
| 1x3dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 44.0 | 4.74e-01 | 82.2% | 83.9% |
| 5wl1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 43.0 | 4.87e-01 | 75.6% | 95.0% |
| 4nn5C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 43.0 | 4.99e-01 | 89.6% | 100.0% |
| 1f6fB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 42.0 | 4.84e-01 | 100.0% | 99.0% |
| 4o5lL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 42.0 | 4.78e-01 | 74.1% | 94.2% |
| 2hczX02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.59 | 39.0 | 4.30e-01 | 87.4% | 84.6% |
| 2n1kA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 40.0 | 4.49e-01 | 84.4% | 88.7% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 43.0 | 4.70e-01 | 74.1% | 92.7% |
| 1cd9D01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 43.0 | 4.78e-01 | 100.0% | 95.3% |
| 3lb6C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 4.58e-01 | 87.4% | 100.0% |
| 1qg3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 4.61e-01 | 100.0% | 95.2% |
| 5eh1A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 43.0 | 4.80e-01 | 100.0% | 99.1% |
| 8deeJ01 | 2.60.40.350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 35.0 | 4.18e-01 | 88.1% | 97.6% |
| 2wngA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.64e-01 | 100.0% | 97.2% |
| 3q2wA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.56 | 40.0 | 4.52e-01 | 100.0% | 99.0% |
| 2w59B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.56e-01 | 88.9% | 93.0% |
| 1f00I02 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 36.0 | 4.20e-01 | 98.5% | 98.9% |
| 4aq1A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 36.0 | 4.18e-01 | 88.1% | 96.8% |
| 8gz3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 34.0 | 3.91e-01 | 76.3% | 92.5% |
| 3vvvA00 | 2.60.40.2840 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 39.0 | 4.30e-01 | 83.7% | 98.1% |
| 5jtwA05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.52 | 42.0 | 4.38e-01 | 94.1% | 96.7% |
| 6ro0B02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 23.0 | 2.60e-01 | 76.3% | 51.8% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3747960 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.75 | 43.0 | 5.64e-01 | 98.5% | 97.5% |
| 3752473 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.72 | 45.0 | 5.52e-01 | 98.5% | 94.4% |
| 3519299 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 44.0 | 5.58e-01 | 98.5% | 98.8% |
| 3616426 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.72 | 45.0 | 5.47e-01 | 99.3% | 94.4% |
| 5080061 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.72 | 42.0 | 5.38e-01 | 99.3% | 98.8% |
| 3996778 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.71 | 44.0 | 5.55e-01 | 99.3% | 100.0% |
| 3932558 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.70 | 43.0 | 5.46e-01 | 88.1% | 98.8% |
| 3861103 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.69 | 43.0 | 5.25e-01 | 100.0% | 97.6% |
| 3625872 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 43.0 | 5.17e-01 | 99.3% | 94.4% |
| 3771466 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 42.0 | 5.23e-01 | 100.0% | 98.8% |
| 3785160 | 11.1.1.1098 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29323 | 0.68 | 46.0 | 4.70e-01 | 85.2% | 70.8% |
| 5040150 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.67 | 40.0 | 4.96e-01 | 98.5% | 94.1% |
| 3249479 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 41.0 | 4.94e-01 | 84.4% | 96.5% |
| 5059200 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.66 | 40.0 | 4.99e-01 | 98.5% | 96.5% |
| 5068353 | 11.1.1.249 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 | 0.66 | 40.0 | 5.00e-01 | 98.5% | 97.6% |
| 5067904 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.66 | 41.0 | 5.04e-01 | 99.3% | 98.8% |
| 4314530 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.64 | 40.0 | 4.66e-01 | 98.5% | 86.0% |
| 5039462 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 39.0 | 4.88e-01 | 99.3% | 98.8% |
| 5068603 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 39.0 | 4.75e-01 | 98.5% | 96.5% |
| 3514259 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.63 | 44.0 | 4.78e-01 | 71.9% | 91.3% |
| 5059794 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.63 | 38.0 | 4.65e-01 | 98.5% | 95.3% |
| 3215148 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.62 | 39.0 | 4.79e-01 | 88.1% | 100.0% |
| 4070165 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.62 | 44.0 | 5.08e-01 | 100.0% | 99.0% |
| 5070961 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 40.0 | 4.80e-01 | 100.0% | 98.9% |
| 5059896 | 11.1.4.139 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PKD_4 | 0.61 | 45.0 | 4.01e-01 | 76.3% | 64.7% |
| 4002781 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 47.0 | 4.66e-01 | 91.9% | 75.9% |
| 3249345 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 35.0 | 4.42e-01 | 88.1% | 100.0% |
| 4353523 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.61 | 43.0 | 4.98e-01 | 88.9% | 99.0% |
| 3212149 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 47.0 | 5.13e-01 | 85.2% | 99.1% |
| 5047245 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.60 | 41.0 | 4.80e-01 | 84.4% | 98.9% |
| 5046076 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.60 | 38.0 | 4.63e-01 | 98.5% | 100.0% |
| 5062508 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.60 | 39.0 | 4.63e-01 | 98.5% | 94.7% |
| 3872070 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.59 | 43.0 | 4.51e-01 | 100.0% | 80.8% |
| 3884372 | 11.1.1.711 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FN3_IL27B_N | 0.57 | 40.0 | 4.61e-01 | 100.0% | 98.0% |
| 5034804 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.57 | 43.0 | 3.74e-01 | 84.4% | 51.7% |
| 5070164 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 36.0 | 4.21e-01 | 75.6% | 95.8% |
| 4951793 | 11.1.1.155 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3458 | 0.51 | 33.0 | 3.92e-01 | 77.0% | 97.8% |
D3
medium
residues 267-362
D4
medium
residues 363-459