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membrane_protein

Euk-Vir

Mumps_orthorubulavirus

membrane_protein__NP_054710__Mumps_orthorubulavirus__2560602

Identity

Accession:: NP_054710 ↗
Protein ID:: membrane_protein
Kingdom:: euk

Quality

75.9 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Orthorubulavirus› Mumps_orthorubulavirus

TaxID: 2560602

Cluster

View cluster (63 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-67_83-180

PDB

Domain cluster: rep: matrix_protein__YP_009094039__Pneumovirus_dog_Bari_100-12_ITA_2012__2482952__D2-120

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00661.29 best	Matrix_Paramyxo_N	129.6	1.10e-37	100.0%	79.7%

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4g1lA01	2.70.20.50	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain	0.91	87.0	7.84e-01	100.0%	79.1%
2vqpA01	2.70.20.30	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › HRSV-S2 matrix protein, N-terminal domain	0.79	68.0	7.01e-01	100.0%	97.5%
1h2cA00	2.70.20.20	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain	0.76	64.0	6.47e-01	88.2%	95.2%
2k5nA00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.67	28.0	3.61e-01	78.0%	64.9%
3f1jA00	2.70.20.40	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Borna disease virus, matrix protein	0.65	54.0	5.23e-01	88.2%	83.6%
3op1A02	2.40.30.30	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like	0.63	32.0	3.45e-01	86.6%	55.0%
4g1gA02	2.70.20.60	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, C-terminal domain	0.60	52.0	4.78e-01	96.1%	81.1%
2dd7A00	2.40.155.10	Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein	0.58	52.0	4.40e-01	100.0%	78.0%
2x1cB01	3.60.60.10	Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A	0.57	39.0	3.03e-01	70.1%	88.3%
2pslA00	2.40.155.10	Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein	0.54	48.0	4.11e-01	100.0%	77.0%
2vfkA00	3.90.1140.10	Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase	0.54	43.0	3.73e-01	85.8%	94.1%
2c9jA00	2.40.155.10	Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein	0.54	48.0	4.08e-01	100.0%	77.5%
3gtyX02	3.10.50.30	Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain	0.54	34.0	4.05e-01	96.9%	96.4%
1uisA00	2.40.155.10	Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein	0.51	45.0	3.84e-01	100.0%	75.0%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
863407	54.1.1.1 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix	0.92	88.0	8.17e-01	100.0%	83.7%
2887049	54.1.1.1 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix	0.87	71.0	7.60e-01	88.2%	97.3%
1503359	54.1.1.2 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Pneumo_matrix	0.79	69.0	6.91e-01	100.0%	92.2%
1109145	54.1.1.4 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › BDV_M	0.65	53.0	5.23e-01	88.2%	82.4%
5045292	264.2.1.0 ↗	beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain	0.64	48.0	5.21e-01	92.9%	96.2%
2321027	54.1.1.6 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C	0.62	51.0	4.71e-01	93.7%	68.5%
3955687	264.1.1.9 ↗	beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2	0.60	48.0	4.42e-01	85.0%	95.2%
1155590	54.1.1.6 ↗	beta barrels › EV matrix protein › EV matrix protein › EV matrix protein › Matrix_Paramyxo_C	0.60	52.0	4.51e-01	96.1%	68.7%
4375028	264.2.1.0 ↗	beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain	0.56	48.0	4.85e-01	93.7%	99.2%
3962197	264.1.1.0 ↗	beta barrels › LigT-like › LigT-related › LigT-related	0.55	47.0	4.32e-01	94.5%	95.3%
4210460	264.2.1.0 ↗	beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain	0.55	44.0	4.57e-01	88.2%	98.3%
4470749	264.2.1.0 ↗	beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain	0.54	46.0	4.53e-01	92.9%	96.3%
3472865	264.2.1.0 ↗	beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain	0.54	46.0	4.74e-01	93.7%	98.4%
3062826	271.1.1.1 ↗	beta barrels › GFP-like › GFP-like › GFP-like › GFP	0.54	48.0	3.98e-01	100.0%	73.3%
4930521	264.2.1.0 ↗	beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain	0.54	44.0	4.60e-01	93.7%	100.0%
5022097	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.53	29.0	3.17e-01	85.8%	62.0%

D2 high residues 185-358

PDB

Domain cluster: rep: M__YP_009508513__Antarctic_penguin_virus_B__2006073__D6-17_185-340

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23765.2 best	Matrix_Paramyxo_C	205.5	5.70e-61	93.7%	100.0%