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metal-dependent_phosphohydrolase
Euk-VirTunisvirus_fontaine2
metal-dependent_phosphohydrolase__YP_009507229__Tunisvirus_fontaine2__1421067
Identity
- Accession:
- YP_009507229 ↗
- Protein ID:
- metal-dependent_phosphohydrolase
- Kingdom:
- euk
Quality
85.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Losannavirus›
Tunisvirus_fontaine2
TaxID: 1421067
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-105
Domain cluster:
rep: MW302330.1__QTJ62991.1__X__00013__D3-108
D2
high
residues 116-202
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b57A02 | 1.20.58.1910 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.92 | 76.0 | 7.45e-01 | 100.0% | 80.6% |
| 3gw7A00 | 1.10.3210.50 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.84 | 76.0 | 5.52e-01 | 100.0% | 38.6% |
| 2pjqA02 | 1.20.58.1910 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 80.0 | 7.14e-01 | 100.0% | 77.4% |
| 1a80A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.71 | 44.0 | 3.11e-01 | 96.6% | 19.9% |
| 6kikA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.67 | 42.0 | 2.96e-01 | 96.6% | 19.6% |
| 8carA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.66 | 47.0 | 3.07e-01 | 100.0% | 17.5% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.63 | 48.0 | 5.04e-01 | 97.7% | 91.0% |
| 1qwkA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.62 | 43.0 | 2.94e-01 | 96.6% | 20.2% |
| 3ma5A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 40.0 | 4.04e-01 | 100.0% | 64.4% |
| 2pn5A09 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.62 | 44.0 | 3.07e-01 | 100.0% | 22.3% |
| 1wjtA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.61 | 39.0 | 3.76e-01 | 98.9% | 55.3% |
| 1fgjA02 | 1.20.850.10 | Mainly Alpha › Up-down Bundle › Hydroxylamine Oxidoreductase; Chain A, domain 2 › Hydroxylamine Oxidoreductase; Chain A, domain 2 | 0.59 | 36.0 | 2.72e-01 | 77.0% | 23.0% |
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.57 | 42.0 | 4.35e-01 | 96.6% | 88.5% |
| 1k90B03 | 1.20.140.60 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.56 | 46.0 | 4.17e-01 | 89.7% | 66.1% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.56 | 48.0 | 4.62e-01 | 100.0% | 85.0% |
| 1afsA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.55 | 43.0 | 2.92e-01 | 96.6% | 22.9% |
| 8ex5A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.55 | 47.0 | 3.69e-01 | 95.4% | 74.3% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.55 | 48.0 | 3.93e-01 | 100.0% | 63.0% |
| 8h6rA01 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.55 | 41.0 | 4.19e-01 | 100.0% | 83.5% |
| 3krbA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.54 | 43.0 | 2.96e-01 | 96.6% | 24.4% |
| 2rekA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 48.0 | 3.85e-01 | 100.0% | 62.2% |
| 4evfA04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.53 | 34.0 | 3.69e-01 | 98.9% | 81.2% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 41.0 | 3.71e-01 | 100.0% | 59.3% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 46.0 | 3.97e-01 | 100.0% | 88.9% |
| 2uvaG06 | 1.20.930.70 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.52 | 33.0 | 3.00e-01 | 95.4% | 46.2% |
| 5n17A01 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 46.0 | 4.40e-01 | 97.7% | 81.7% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 43.0 | 3.85e-01 | 90.8% | 79.0% |
| 1avcA07 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.52 | 33.0 | 3.53e-01 | 94.3% | 76.0% |
| 3bm3A00 | 3.40.91.80 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.51 | 44.0 | 3.24e-01 | 100.0% | 39.8% |
| 5hyhA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.51 | 44.0 | 3.16e-01 | 100.0% | 51.2% |
| 1oglA01 | 1.20.1680.10 | Mainly Alpha › Up-down Bundle › all-alpha NTP pyrophosphatases › Type II deoxyuridine triphosphatase | 0.50 | 35.0 | 3.12e-01 | 71.3% | 95.8% |
| 2i39B00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.50 | 35.0 | 3.25e-01 | 73.6% | 85.7% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945175 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.97 | 74.0 | 5.39e-01 | 100.0% | 33.7% |
| 4941136 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.96 | 74.0 | 5.53e-01 | 100.0% | 37.3% |
| 5077999 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.95 | 73.0 | 5.42e-01 | 100.0% | 36.3% |
| 5044683 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.95 | 73.0 | 5.42e-01 | 100.0% | 36.3% |
| 4950795 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.94 | 72.0 | 5.35e-01 | 100.0% | 35.8% |
| 3726887 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.93 | 73.0 | 5.14e-01 | 100.0% | 31.1% |
| 3260673 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.90 | 78.0 | 5.58e-01 | 90.8% | 40.0% |
| 3196273 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.87 | 72.0 | 5.16e-01 | 100.0% | 34.1% |
| 4789 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.86 | 81.0 | 5.94e-01 | 100.0% | 42.6% |
| 3449702 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.85 | 81.0 | 5.78e-01 | 100.0% | 40.6% |
| 4984229 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.85 | 80.0 | 5.77e-01 | 100.0% | 41.7% |
| 3943504 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.85 | 78.0 | 5.55e-01 | 100.0% | 37.0% |
| 4791 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.84 | 80.0 | 5.83e-01 | 100.0% | 43.2% |
| 5058334 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.84 | 79.0 | 5.72e-01 | 100.0% | 41.4% |
| 4985686 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.81 | 77.0 | 5.50e-01 | 100.0% | 40.0% |
| 3634277 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.77 | 72.0 | 5.05e-01 | 100.0% | 37.0% |
| 5004208 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.76 | 73.0 | 5.26e-01 | 100.0% | 41.9% |
| 3355898 | 109.4.1.1886 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › At5g52880_ARM | 0.68 | 48.0 | 4.01e-01 | 100.0% | 42.7% |
| 3435020 | 109.4.1.1886 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › At5g52880_ARM | 0.67 | 47.0 | 4.54e-01 | 100.0% | 64.0% |
| 3355292 | 601.1.1.66 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › At5g52880_ARM | 0.67 | 51.0 | 4.69e-01 | 100.0% | 63.6% |
| 3233535 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 36.0 | 3.74e-01 | 90.8% | 60.0% |
| 154362 | 371.1.1.3 ↗ | few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholip_A2_3 | 0.59 | 45.0 | 4.04e-01 | 89.7% | 58.5% |
| 4097806 | 629.1.1.1 ↗ | alpha bundles › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › Nitrate_red_del | 0.57 | 42.0 | 3.16e-01 | 88.5% | 31.6% |
| 3492369 | 622.4.1.21 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Frag1 | 0.56 | 50.0 | 4.49e-01 | 100.0% | 95.8% |
| 5076868 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.55 | 47.0 | 3.64e-01 | 95.4% | 70.5% |
| 4976770 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.54 | 48.0 | 4.82e-01 | 100.0% | 96.7% |
| 4954300 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 40.0 | 2.85e-01 | 78.2% | 76.1% |
| 3715444 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 48.0 | 3.45e-01 | 100.0% | 35.8% |
| 4974941 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.54 | 46.0 | 3.23e-01 | 96.6% | 29.8% |
| 5011052 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 45.0 | 3.62e-01 | 95.4% | 76.0% |
| 4014114 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 46.0 | 3.27e-01 | 100.0% | 74.0% |
| 4993954 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 44.0 | 3.53e-01 | 98.9% | 74.4% |
| 3605615 | 174.1.1.51 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › SCAMP | 0.52 | 43.0 | 3.40e-01 | 89.7% | 71.1% |
| 4932195 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.52 | 45.0 | 4.08e-01 | 100.0% | 70.8% |
| 3938720 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.52 | 45.0 | 3.75e-01 | 100.0% | 90.3% |
| 5081113 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 45.0 | 3.53e-01 | 100.0% | 88.5% |
| 4979163 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.52 | 41.0 | 3.47e-01 | 87.4% | 87.1% |
| 5042512 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 44.0 | 3.53e-01 | 98.9% | 72.6% |
| 4416029 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 44.0 | 3.50e-01 | 100.0% | 73.0% |
| 4990077 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 42.0 | 3.36e-01 | 94.3% | 71.3% |
| 4973569 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 45.0 | 3.37e-01 | 100.0% | 81.1% |
| 3470345 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.51 | 45.0 | 3.59e-01 | 100.0% | 87.6% |
| 5011651 | 1079.1.1.8 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › LysE | 0.51 | 43.0 | 3.52e-01 | 95.4% | 78.9% |
| 4148138 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 43.0 | 3.44e-01 | 97.7% | 72.2% |
| 5048536 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 42.0 | 3.43e-01 | 98.9% | 76.3% |
| 4180514 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 42.0 | 3.30e-01 | 95.4% | 69.5% |
| 3926870 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.50 | 42.0 | 3.10e-01 | 95.4% | 62.8% |