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methyltransferase-helicase
Euk-VirTea_plant_line_pattern_virus
methyltransferase-helicase__YP_009551567__Tea_plant_line_pattern_virus__2419940
Identity
- Accession:
- YP_009551567 ↗
- Protein ID:
- methyltransferase-helicase
- Kingdom:
- euk
Quality
74.6
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Bromoviridae›
Ilarvirus›
Tea_plant_line_pattern_virus
TaxID: 2419940
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 737-878
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13604.13 best | AAA_30 | 29.3 | 1.00e-06 | 95.8% | 63.3% |
| PF01443.25 | Viral_helicase1 | 81.2 | 1.40e-22 | 94.4% | 46.1% |
| PF13245.13 | AAA_19 | 32.0 | 1.80e-07 | 84.5% | 92.5% |
D2
high
residues 883-1037
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01443.25 best | Viral_helicase1 | 53.5 | 4.30e-14 | 77.4% | 39.5% |
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vkwA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.89 | 79.0 | 8.11e-01 | 96.8% | 95.3% |
| 6jimB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.89 | 74.0 | 8.01e-01 | 98.7% | 100.0% |
| 1pjrA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.82 | 71.0 | 6.44e-01 | 90.3% | 94.0% |
| 4b3fX03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 70.0 | 6.35e-01 | 90.3% | 90.6% |
| 2xzlA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 71.0 | 6.27e-01 | 91.0% | 90.1% |
| 5eanA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 62.0 | 5.56e-01 | 80.0% | 92.8% |
| 1w36B03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 68.0 | 5.36e-01 | 91.6% | 87.6% |
| 3u4qA04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 69.0 | 5.70e-01 | 94.2% | 91.7% |
| 5rl9B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 66.0 | 6.73e-01 | 89.7% | 96.0% |
| 6vsxA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 64.0 | 6.41e-01 | 91.0% | 96.2% |
| 3dmnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 64.0 | 6.37e-01 | 91.0% | 93.8% |
| 3jb9X01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 63.0 | 5.46e-01 | 90.3% | 80.8% |
| 1w36D03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 60.0 | 5.77e-01 | 85.2% | 98.8% |
| 3upuA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 55.0 | 5.98e-01 | 77.4% | 98.5% |
| 3e1sA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 59.0 | 6.25e-01 | 86.5% | 93.6% |
| 8jx6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 52.0 | 4.76e-01 | 77.4% | 81.5% |
| 2pl3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 50.0 | 4.35e-01 | 74.2% | 70.7% |
| 3i5xA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 49.0 | 4.20e-01 | 74.2% | 73.3% |
| 3en0C00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.68 | 49.0 | 4.07e-01 | 73.5% | 60.4% |
| 2fwrA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 48.0 | 4.59e-01 | 73.5% | 75.3% |
| 4nl4H03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 50.0 | 4.59e-01 | 77.4% | 80.1% |
| 1rifA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 48.0 | 4.44e-01 | 73.5% | 79.2% |
| 2xgjB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 49.0 | 4.49e-01 | 77.4% | 71.8% |
| 2ykgA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 47.0 | 4.22e-01 | 73.5% | 83.8% |
| 3b85A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 48.0 | 4.54e-01 | 75.5% | 76.5% |
| 2zpaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 48.0 | 5.10e-01 | 74.8% | 86.8% |
| 3vu9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 49.0 | 4.36e-01 | 76.8% | 86.5% |
| 6yhrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 47.0 | 4.38e-01 | 75.5% | 83.0% |
| 5dzsB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 44.0 | 4.70e-01 | 70.3% | 91.7% |
| 5lstA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 46.0 | 4.15e-01 | 75.5% | 77.7% |
| 2ri0A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 44.0 | 3.86e-01 | 73.5% | 94.0% |
| 4nh0B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 45.0 | 3.64e-01 | 77.4% | 69.9% |
| 1fs5A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 43.0 | 3.60e-01 | 72.9% | 87.2% |
| 3q71A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.60 | 46.0 | 4.24e-01 | 80.6% | 89.7% |
| 2ef5A00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.59 | 50.0 | 4.13e-01 | 90.3% | 98.9% |
| 2v1xA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 42.0 | 3.75e-01 | 73.5% | 65.5% |
| 3rc3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 49.0 | 5.05e-01 | 89.0% | 97.9% |
| 7jgsD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 42.0 | 3.94e-01 | 75.5% | 81.7% |
| 5wqoB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 41.0 | 3.69e-01 | 73.5% | 73.2% |
| 3pzlB00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.57 | 51.0 | 4.15e-01 | 98.1% | 92.2% |
| 4dcmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 42.0 | 4.09e-01 | 77.4% | 87.4% |
| 5kivA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.55 | 46.0 | 4.30e-01 | 87.7% | 96.3% |
| 4akgA15 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 40.0 | 4.31e-01 | 74.8% | 89.8% |
| 1sxjA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 3.94e-01 | 77.4% | 77.1% |
| 7jgsE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 39.0 | 3.79e-01 | 74.8% | 81.1% |
| 2qw5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 38.0 | 3.02e-01 | 72.9% | 81.3% |
| 4gkpB00 | 3.40.850.20 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › | 0.53 | 39.0 | 3.33e-01 | 74.8% | 95.3% |
| 3e15A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 44.0 | 3.59e-01 | 88.4% | 96.2% |
| 5gjnA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.51 | 37.0 | 3.32e-01 | 76.8% | 87.5% |
| 1ccwB01 | 3.20.20.240 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase | 0.50 | 39.0 | 2.94e-01 | 83.9% | 72.4% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1323360 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.87 | 67.0 | 7.57e-01 | 83.9% | 100.0% |
| 4030474 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.82 | 70.0 | 4.70e-01 | 89.0% | 38.3% |
| 4266784 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.82 | 71.0 | 4.54e-01 | 90.3% | 55.0% |
| 4449595 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.82 | 71.0 | 4.50e-01 | 90.3% | 53.9% |
| 3186716 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.82 | 70.0 | 4.39e-01 | 90.3% | 51.2% |
| 3837994 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.81 | 70.0 | 4.52e-01 | 89.7% | 55.0% |
| 5080800 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.81 | 64.0 | 5.71e-01 | 81.3% | 97.1% |
| 3741693 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.81 | 70.0 | 4.41e-01 | 90.3% | 51.5% |
| 3578404 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.81 | 66.0 | 5.76e-01 | 83.2% | 87.9% |
| 3385476 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.81 | 70.0 | 4.51e-01 | 89.7% | 54.7% |
| 3246401 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.81 | 71.0 | 6.26e-01 | 90.3% | 95.7% |
| 3435461 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.81 | 71.0 | 6.29e-01 | 91.0% | 92.9% |
| 3964423 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.81 | 71.0 | 4.54e-01 | 91.0% | 55.5% |
| 3698565 | 2004.1.1.508 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 | 0.81 | 61.0 | 4.33e-01 | 77.4% | 98.8% |
| 3222867 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.81 | 70.0 | 6.18e-01 | 90.3% | 89.3% |
| 3927962 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.81 | 70.0 | 6.02e-01 | 90.3% | 95.7% |
| 3735016 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.81 | 70.0 | 4.40e-01 | 90.3% | 53.5% |
| 3726613 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.81 | 70.0 | 5.87e-01 | 91.0% | 93.2% |
| 5015395 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.81 | 70.0 | 6.54e-01 | 91.0% | 95.7% |
| 4994530 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 4.81e-01 | 91.0% | 38.8% |
| 4498286 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 72.0 | 6.45e-01 | 94.8% | 97.6% |
| 3210977 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 71.0 | 6.29e-01 | 91.6% | 86.2% |
| 3428412 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 6.14e-01 | 91.0% | 90.0% |
| 3891107 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 71.0 | 6.17e-01 | 91.6% | 92.3% |
| 4028314 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 5.94e-01 | 91.0% | 90.8% |
| 4029484 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 5.39e-01 | 91.0% | 77.1% |
| 4943170 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 6.37e-01 | 90.3% | 94.9% |
| 3520006 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 6.13e-01 | 90.3% | 94.0% |
| 3878703 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 5.96e-01 | 91.0% | 88.9% |
| 3567663 | 2004.1.1.185 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 | 0.80 | 69.0 | 4.58e-01 | 90.3% | 34.8% |
| 5024276 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 5.99e-01 | 91.0% | 87.4% |
| 4029378 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 6.14e-01 | 91.0% | 90.7% |
| 3936669 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 69.0 | 6.21e-01 | 90.3% | 89.3% |
| 3605331 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 70.0 | 6.18e-01 | 91.6% | 87.4% |
| 4336608 | 2004.1.1.185 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 | 0.80 | 70.0 | 4.62e-01 | 92.9% | 34.2% |
| 3810871 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.80 | 69.0 | 6.05e-01 | 91.0% | 89.1% |
| 3240292 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 69.0 | 6.16e-01 | 91.0% | 89.5% |
| 3955473 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 67.0 | 6.13e-01 | 87.7% | 97.4% |
| 3265034 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 69.0 | 5.99e-01 | 91.0% | 82.2% |
| 3535364 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 69.0 | 6.14e-01 | 91.0% | 87.6% |
| 1108542 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.79 | 61.0 | 4.59e-01 | 78.7% | 96.7% |
| 3731003 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 69.0 | 5.98e-01 | 91.0% | 87.6% |
| 3433486 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 69.0 | 6.03e-01 | 91.0% | 88.2% |
| 3784726 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 69.0 | 5.93e-01 | 91.0% | 89.1% |
| 3924506 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 69.0 | 6.29e-01 | 91.6% | 91.5% |
| 3408803 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 69.0 | 6.30e-01 | 91.0% | 92.3% |
| 3265097 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 69.0 | 5.61e-01 | 91.6% | 76.3% |
| 3930896 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 68.0 | 6.24e-01 | 90.3% | 93.8% |
| 3227245 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 68.0 | 5.93e-01 | 91.0% | 83.6% |
| 4331804 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.78 | 68.0 | 6.26e-01 | 91.0% | 89.2% |
| 3247954 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.78 | 68.0 | 6.09e-01 | 90.3% | 89.3% |
| 3194173 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.78 | 68.0 | 5.87e-01 | 91.0% | 83.0% |
| 3796494 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.78 | 68.0 | 5.69e-01 | 91.0% | 72.0% |
| 3786529 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.78 | 70.0 | 6.06e-01 | 93.5% | 92.9% |
| 3189268 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.78 | 60.0 | 5.03e-01 | 79.4% | 92.4% |
| 3697444 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.78 | 69.0 | 5.76e-01 | 91.6% | 73.9% |
| 3639642 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.78 | 68.0 | 5.79e-01 | 91.6% | 75.8% |
| 3743179 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.78 | 68.0 | 4.15e-01 | 91.6% | 21.1% |
| 4677652 | 2004.1.1.1017 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12, UvrD_C | 0.78 | 69.0 | 5.53e-01 | 94.2% | 88.6% |
| None | — | 0.78 | 65.0 | 6.06e-01 | 87.7% | 96.8% | |
| 4951118 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.78 | 69.0 | 5.78e-01 | 94.2% | 97.2% |
| 3760903 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.77 | 60.0 | 5.66e-01 | 79.4% | 97.8% |
| 3266728 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.77 | 69.0 | 6.16e-01 | 94.2% | 92.9% |
| 4190223 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.77 | 68.0 | 4.14e-01 | 94.2% | 46.9% |
| 3278699 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.72 | 56.0 | 5.63e-01 | 86.5% | 79.4% |
| 3965772 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.72 | 59.0 | 5.89e-01 | 85.2% | 97.5% |
| None | — | 0.70 | 59.0 | 6.10e-01 | 87.1% | 99.3% | |
| 3385675 | 2004.1.1.298 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase | 0.70 | 53.0 | 5.47e-01 | 86.5% | 83.4% |
| 4367584 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 57.0 | 4.08e-01 | 89.0% | 86.4% |
| 3676955 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.68 | 56.0 | 5.37e-01 | 85.2% | 92.5% |
| 4094635 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 50.0 | 4.68e-01 | 76.1% | 83.2% |
| 3663731 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.68 | 51.0 | 5.45e-01 | 76.8% | 97.0% |
| 5061526 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.68 | 48.0 | 4.16e-01 | 73.5% | 71.8% |
| 4986882 | 2004.1.1.161 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N | 0.67 | 51.0 | 4.77e-01 | 77.4% | 81.1% |
| 3242523 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 52.0 | 5.68e-01 | 85.2% | 95.4% |
| 3970090 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 49.0 | 4.52e-01 | 76.1% | 78.5% |
| 3642135 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.67 | 50.0 | 4.14e-01 | 78.1% | 63.3% |
| None | — | 0.66 | 53.0 | 4.33e-01 | 82.6% | 58.5% | |
| 3267758 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 47.0 | 5.06e-01 | 85.2% | 84.4% |
| 5031075 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 49.0 | 5.21e-01 | 76.8% | 96.3% |
| 3980599 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.65 | 53.0 | 4.54e-01 | 85.8% | 89.0% |
| 5078123 | 2004.1.1.791 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_bR2 | 0.65 | 47.0 | 3.99e-01 | 74.8% | 66.0% |
| 3605939 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 47.0 | 5.05e-01 | 85.2% | 86.7% |
| 3937639 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.63 | 55.0 | 4.17e-01 | 92.9% | 72.4% |
| 5050534 | 2004.1.1.260 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MEDS | 0.63 | 46.0 | 4.39e-01 | 76.1% | 96.8% |
| 5002744 | 2004.1.1.260 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MEDS | 0.62 | 45.0 | 4.30e-01 | 75.5% | 88.1% |
| 3895162 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.59 | 52.0 | 3.89e-01 | 92.9% | 84.4% |
| 3179008 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.59 | 43.0 | 3.33e-01 | 74.2% | 60.0% |
| 4543745 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 44.0 | 3.00e-01 | 76.1% | 37.3% |
| 4121763 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 43.0 | 2.96e-01 | 76.8% | 35.9% |
| 4011978 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 43.0 | 4.16e-01 | 76.1% | 79.4% |
| 3784464 | 2004.1.1.272 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNA12 | 0.58 | 42.0 | 3.28e-01 | 76.1% | 62.6% |
| 4969850 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 42.0 | 3.30e-01 | 76.8% | 80.9% |
| 4318397 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 41.0 | 4.28e-01 | 76.1% | 86.4% |
| 3402694 | 2004.1.1.98 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 | 0.53 | 40.0 | 3.73e-01 | 78.7% | 75.4% |
D3
medium
residues 202-306_529-565
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01660.23 best | Vmethyltransf | 48.9 | 7.00e-13 | 99.3% | 30.2% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rghA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 25.0 | 3.03e-01 | 75.4% | 63.5% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.54 | 24.0 | 3.32e-01 | 79.6% | 81.3% |
| 3kd4A03 | 2.60.120.1130 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 26.0 | 2.65e-01 | 85.2% | 47.4% |
| 6ruiK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.51 | 25.0 | 2.87e-01 | 81.0% | 62.1% |
| 3o6qA02 | 3.30.70.2720 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 27.0 | 2.95e-01 | 73.9% | 62.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5007119 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.66 | 27.0 | 3.09e-01 | 73.9% | 49.5% |
| 3849084 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.50 | 36.0 | 2.56e-01 | 71.8% | 41.1% |
| 3755410 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.50 | 36.0 | 2.54e-01 | 71.8% | 40.7% |
D4
medium
residues 307-417_508-528
Domain cluster:
rep: uncovered_polypeptide_polyprotein__YP_004464917_245-428__Cutthroat_trout_virus__1016879__D45-170
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 37.0 | 4.19e-01 | 70.5% | 79.4% |
| 2qsdA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 28.0 | 3.71e-01 | 90.2% | 85.1% |
| 2b9sA02 | 1.10.10.41 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Yeast DNA topoisomerase - domain 1 | 0.57 | 36.0 | 4.21e-01 | 77.3% | 94.3% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.55 | 38.0 | 4.37e-01 | 95.5% | 98.9% |
| 1qzyA01 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.55 | 51.0 | 3.93e-01 | 98.5% | 85.1% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 32.0 | 3.48e-01 | 99.2% | 69.8% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.54 | 33.0 | 3.87e-01 | 90.9% | 92.9% |
| 2f07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 38.0 | 3.36e-01 | 73.5% | 57.1% |
| 3s6bA01 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.53 | 47.0 | 3.74e-01 | 96.2% | 91.3% |
| 5ljmA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 39.0 | 3.47e-01 | 82.6% | 93.6% |
| 2zsgA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.51 | 45.0 | 3.74e-01 | 97.0% | 93.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3780345 | 101.1.17.32 ↗ | alpha arrays › HTH › HTH › FF domain › LRR_LRWD1 | 0.61 | 33.0 | 2.94e-01 | 71.2% | 35.8% |
| 3482328 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.59 | 32.0 | 3.54e-01 | 98.5% | 64.8% |
| 4025452 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 31.0 | 3.32e-01 | 98.5% | 59.1% |
| 4181293 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 30.0 | 3.28e-01 | 98.5% | 61.8% |
| 4381440 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 31.0 | 3.33e-01 | 98.5% | 61.7% |
| 3234976 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 31.0 | 3.33e-01 | 98.5% | 64.5% |
| 3701882 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.54 | 29.0 | 3.44e-01 | 76.5% | 74.7% |
| 4112182 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 30.0 | 3.21e-01 | 99.2% | 60.2% |
| 4934939 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 36.0 | 3.97e-01 | 75.8% | 83.6% |
| 3593339 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 31.0 | 3.28e-01 | 99.2% | 64.3% |
| 3265214 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 30.0 | 3.26e-01 | 99.2% | 64.3% |
| 3404932 | 109.4.1.103 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GLE1 | 0.52 | 37.0 | 2.89e-01 | 75.0% | 54.4% |
| 3244401 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 30.0 | 3.23e-01 | 98.5% | 65.2% |
| 5041715 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 33.0 | 3.53e-01 | 98.5% | 76.4% |
| 3704156 | 283.1.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 | 0.51 | 44.0 | 3.90e-01 | 93.2% | 100.0% |
| 5022530 | 2484.1.1.334 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1786 | 0.50 | 39.0 | 2.99e-01 | 83.3% | 88.4% |
| 3412176 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.50 | 31.0 | 3.07e-01 | 100.0% | 57.9% |
| 3777845 | 633.23.1.17 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA | 0.50 | 35.0 | 2.87e-01 | 72.7% | 94.7% |
D5
medium
residues 613-736
Domain cluster:
rep: replicase__NP_059451__Soil-borne_cereal_mosaic_virus__100887__D845-991
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 45.0 | 4.81e-01 | 100.0% | 69.7% |
| 3vkwA01 | 3.30.450.420 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.72 | 66.0 | 6.16e-01 | 100.0% | 81.3% |
| 1m5yC02 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.60 | 39.0 | 3.87e-01 | 82.3% | 62.5% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 47.0 | 4.58e-01 | 100.0% | 85.0% |
| 3nhqC03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.51 | 40.0 | 3.87e-01 | 84.7% | 87.4% |
| 3okgA02 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.51 | 45.0 | 3.96e-01 | 97.6% | 99.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.71 | 44.0 | 4.61e-01 | 100.0% | 67.8% |
| 3709691 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.65 | 55.0 | 5.04e-01 | 91.1% | 100.0% |
| 4275468 | 223.1.1.95 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › NtrY_N | 0.59 | 54.0 | 4.88e-01 | 100.0% | 91.8% |
| 3967419 | 223.1.1.18 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_4 | 0.58 | 49.0 | 4.61e-01 | 91.1% | 78.0% |
| 4042767 | 223.1.1.103 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE7, PF30448 | 0.56 | 47.0 | 4.60e-01 | 89.5% | 89.6% |
| 4335962 | 223.1.1.95 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › NtrY_N | 0.55 | 46.0 | 4.55e-01 | 88.7% | 100.0% |
| 5038202 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.54 | 26.0 | 2.67e-01 | 100.0% | 43.5% |
| 3978824 | 223.8.1.2 ↗ | a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain › CHASE8 | 0.53 | 46.0 | 4.09e-01 | 91.1% | 75.3% |
| 4929746 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.53 | 47.0 | 4.35e-01 | 100.0% | 75.8% |
| 3948638 | 223.8.1.4 ↗ | a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain › GAPES3 | 0.53 | 45.0 | 4.10e-01 | 90.3% | 80.0% |
| 4934732 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.53 | 47.0 | 4.77e-01 | 100.0% | 95.0% |