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methyltransferase
Euk-VirPenicillium_brevicompactum_tetramycovirus_1
methyltransferase__YP_010086051__Penicillium_brevicompactum_tetramycovirus_1__2485923
Identity
- Accession:
- YP_010086051 ↗
- Protein ID:
- methyltransferase
- Kingdom:
- euk
Quality
79.3
mean pLDDT
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 83-306
Domain cluster:
rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08241.19 best | Methyltransf_11 | 23.0 | 1.40e-04 | 49.1% | 75.8% |
| PF13649.13 | Methyltransf_25 | 31.2 | 3.90e-07 | 47.8% | 78.3% |
D2
high
residues 329-506
Domain cluster:
rep: orf43_gene_product__YP_004956791__Helicoverpa_zea_nudivirus_2__1128424__D636-777
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cfmA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.72 | 63.0 | 6.02e-01 | 91.6% | 100.0% |
| 4pz6A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.70 | 65.0 | 5.85e-01 | 99.4% | 97.9% |
| 1xk5A01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.70 | 60.0 | 5.77e-01 | 90.4% | 88.4% |
| 3ty5A01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.69 | 62.0 | 5.06e-01 | 96.1% | 75.1% |
| 6rarI01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.67 | 57.0 | 5.58e-01 | 89.3% | 100.0% |
| 4ckbA01 | 3.30.470.140 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.65 | 58.0 | 5.81e-01 | 98.3% | 93.8% |
| 3qwuA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.65 | 56.0 | 5.65e-01 | 91.6% | 99.4% |
| 2ep6A01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 31.0 | 3.64e-01 | 92.7% | 86.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3267830 | 206.1.3.30 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › SPN1_m3Gcap_bd | 0.71 | 63.0 | 5.60e-01 | 94.4% | 88.0% |
| 3397951 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.71 | 64.0 | 4.59e-01 | 95.5% | 81.1% |
| 5066075 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.71 | 62.0 | 5.99e-01 | 91.6% | 97.9% |
| 3397601 | 206.1.3.30 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › SPN1_m3Gcap_bd | 0.71 | 63.0 | 5.67e-01 | 94.9% | 77.1% |
| 3688782 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.70 | 65.0 | 5.02e-01 | 99.4% | 60.8% |
| 4047933 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.70 | 61.0 | 5.91e-01 | 92.1% | 95.0% |
| 4213407 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.70 | 62.0 | 4.69e-01 | 93.8% | 87.4% |
| 3310146 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.70 | 65.0 | 5.07e-01 | 99.4% | 65.8% |
| 3298149 | 206.1.3.30 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › SPN1_m3Gcap_bd | 0.70 | 64.0 | 5.71e-01 | 97.2% | 88.3% |
| 5083927 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.70 | 61.0 | 5.64e-01 | 91.6% | 97.2% |
| 4027847 | 206.1.3.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › mRNA_cap_enzyme | 0.69 | 64.0 | 5.96e-01 | 99.4% | 98.6% |
| 3878834 | 206.1.3.30 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › SPN1_m3Gcap_bd | 0.69 | 61.0 | 5.40e-01 | 93.8% | 73.6% |
| 3281941 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.69 | 61.0 | 5.95e-01 | 93.3% | 98.5% |
| 3492438 | 206.1.3.30 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › SPN1_m3Gcap_bd | 0.69 | 61.0 | 5.43e-01 | 93.8% | 82.4% |
| 3550572 | 206.1.3.30 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › SPN1_m3Gcap_bd | 0.69 | 61.0 | 5.33e-01 | 93.8% | 70.4% |
| 3510295 | 206.1.3.30 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › SPN1_m3Gcap_bd | 0.69 | 64.0 | 5.92e-01 | 100.0% | 81.8% |
| 3596262 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.69 | 64.0 | 5.86e-01 | 100.0% | 93.5% |
| 3703188 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.68 | 62.0 | 5.65e-01 | 99.4% | 93.2% |
| 3707854 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.67 | 63.0 | 5.96e-01 | 100.0% | 96.7% |
| 1147807 | 206.1.3.29 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › MCEL_GT_NTPase | 0.66 | 57.0 | 5.90e-01 | 96.6% | 97.6% |
| 1698226 | 206.1.3.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase | 0.64 | 57.0 | 5.47e-01 | 94.9% | 94.1% |
| 3270508 | 206.1.3.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase | 0.64 | 58.0 | 5.35e-01 | 98.3% | 95.2% |
| 3387834 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.63 | 55.0 | 5.49e-01 | 92.1% | 98.9% |
| 3603390 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 23.0 | 3.14e-01 | 89.9% | 80.0% |
D3
high
residues 509-611
Domain cluster:
rep: methyl_transferase__YP_009551546__Aspergillus_fumigatus_polymycovirus_1__2250469__D525-621
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ckmA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 55.0 | 6.15e-01 | 85.4% | 96.4% |
| 4pz7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 58.0 | 5.27e-01 | 100.0% | 87.6% |
| 1p16B02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 58.0 | 5.29e-01 | 100.0% | 91.0% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.57 | 40.0 | 3.50e-01 | 73.8% | 82.4% |
| 3g7pA00 | 1.10.3100.20 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Protein of unknown function DUF269 | 0.55 | 41.0 | 3.72e-01 | 79.6% | 57.9% |
| 2abwA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 40.0 | 3.20e-01 | 83.5% | 97.2% |
| 3oxhA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 33.0 | 3.07e-01 | 93.2% | 48.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3376913 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.69 | 62.0 | 6.09e-01 | 99.0% | 90.9% |
| 3197689 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.65 | 60.0 | 5.14e-01 | 99.0% | 81.3% |
| 3784943 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.65 | 59.0 | 3.95e-01 | 100.0% | 34.3% |
| 371 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.65 | 59.0 | 5.25e-01 | 100.0% | 90.3% |
| 3600310 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 56.0 | 5.33e-01 | 99.0% | 98.3% |
| 4927618 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.57 | 40.0 | 4.14e-01 | 71.8% | 87.4% |
| 4478927 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.56 | 39.0 | 3.96e-01 | 71.8% | 86.0% |
| 5042620 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.55 | 38.0 | 3.74e-01 | 70.9% | 77.3% |
| 4182798 | 2.1.1.88 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD2 | 0.54 | 39.0 | 4.28e-01 | 75.7% | 94.1% |
| 3895610 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 41.0 | 3.23e-01 | 80.6% | 91.8% |
| 3244265 | 2.1.1.317 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF272, PF26704 | 0.54 | 37.0 | 3.30e-01 | 70.9% | 75.3% |
| 4104978 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 40.0 | 3.35e-01 | 80.6% | 88.1% |
| 4278807 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.53 | 36.0 | 3.54e-01 | 95.1% | 64.5% |
| 3677082 | 2.1.1.43 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 | 0.52 | 39.0 | 3.96e-01 | 79.6% | 86.0% |
| 3581922 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.52 | 35.0 | 3.67e-01 | 78.6% | 74.7% |
| 3279958 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.51 | 29.0 | 3.16e-01 | 83.5% | 68.8% |