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methyltransferase_protease_helicase
Euk-VirGrapevine_Syrah_virus_1
methyltransferase_protease_helicase__YP_002775439__Grapevine_Syrah_virus_1__630199
Identity
- Accession:
- YP_002775439 ↗
- Protein ID:
- methyltransferase_protease_helicase
- Kingdom:
- euk
Quality
71.9
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Tymovirales›
Tymoviridae›
Marafivirus›
Grapevine_Syrah_virus_1
TaxID: 630199
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 144-343_593-601
Domain cluster:
rep: uncovered_polypeptide_polyprotein__YP_001086452_0-758__Chrysanthemum_virus_B__12165__D72-292
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01660.23 best | Vmethyltransf | 181.1 | 4.10e-53 | 98.6% | 72.4% |
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hnrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 60.0 | 6.24e-01 | 89.0% | 98.4% |
| 3bkwB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 56.0 | 5.56e-01 | 85.6% | 100.0% |
| 3i9fB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 51.0 | 5.64e-01 | 87.1% | 95.3% |
| 4xcxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 55.0 | 5.45e-01 | 87.6% | 91.2% |
| 5mp7A02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 41.0 | 4.95e-01 | 95.2% | 95.6% |
| 3q87B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 48.0 | 5.33e-01 | 86.6% | 97.0% |
| 3mggB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 49.0 | 5.44e-01 | 89.0% | 100.0% |
| 3egeA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 53.0 | 5.05e-01 | 88.0% | 99.6% |
| 3merA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 49.0 | 5.38e-01 | 86.1% | 98.8% |
| 3gvpA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 40.0 | 4.54e-01 | 86.6% | 86.8% |
| 1vkzA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 24.0 | 3.54e-01 | 94.3% | 89.6% |
| 3c3kA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 39.0 | 4.64e-01 | 85.6% | 99.3% |
| 3ctpA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 38.0 | 4.58e-01 | 85.6% | 98.6% |
| 4gx0B04 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 35.0 | 4.30e-01 | 85.2% | 93.9% |
| 2o4cA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 41.0 | 4.59e-01 | 96.2% | 92.2% |
| 2zw9B01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 52.0 | 4.43e-01 | 97.6% | 97.9% |
| 5towB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 40.0 | 4.54e-01 | 92.3% | 94.4% |
| 7oo1A02 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.57 | 33.0 | 4.25e-01 | 84.7% | 100.0% |
| 4dzzA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 39.0 | 4.00e-01 | 97.1% | 72.3% |
| 4njmA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 42.0 | 4.62e-01 | 94.7% | 96.4% |
| 4c4aA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 36.0 | 4.26e-01 | 86.6% | 93.8% |
| 7uehA01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.55 | 32.0 | 4.13e-01 | 84.2% | 100.0% |
| 1amuA01 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 30.0 | 3.33e-01 | 84.7% | 63.6% |
| 1e0tA01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.55 | 31.0 | 3.92e-01 | 83.3% | 92.7% |
| 2e28A03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.55 | 33.0 | 3.94e-01 | 86.1% | 89.6% |
| 2c31A01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.55 | 41.0 | 4.36e-01 | 90.9% | 86.2% |
| 2va0A00 | 3.30.450.160 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 23.0 | 3.30e-01 | 83.7% | 81.8% |
| 4w7sA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 42.0 | 3.92e-01 | 96.2% | 65.7% |
| 2r8rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 47.0 | 4.73e-01 | 96.7% | 95.2% |
| 1a3wA01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.53 | 32.0 | 3.62e-01 | 84.7% | 79.4% |
| 2gb3A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 43.0 | 4.20e-01 | 92.3% | 77.8% |
| 3ezsA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 45.0 | 4.27e-01 | 93.8% | 78.4% |
| 5z0qA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 45.0 | 4.40e-01 | 91.9% | 85.1% |
| 4ohcC00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 39.0 | 3.91e-01 | 97.1% | 74.8% |
| 2gk6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 3.33e-01 | 96.7% | 55.5% |
| 1l1qA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 40.0 | 4.29e-01 | 95.2% | 95.6% |
| 3e0vB01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.50 | 30.0 | 3.36e-01 | 87.1% | 74.5% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5009911 | 2003.1.5.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran | 0.70 | 59.0 | 5.86e-01 | 88.0% | 93.0% |
| 4988836 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.70 | 51.0 | 5.82e-01 | 87.6% | 100.0% |
| 4990613 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.70 | 59.0 | 5.07e-01 | 88.5% | 86.8% |
| 5019216 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.67 | 55.0 | 5.70e-01 | 88.0% | 92.3% |
| 4012473 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.67 | 56.0 | 4.70e-01 | 88.5% | 61.7% |
| 3254911 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.66 | 56.0 | 4.53e-01 | 89.0% | 68.4% |
| 3272325 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.66 | 55.0 | 5.17e-01 | 87.6% | 88.0% |
| 4023219 | 2003.1.5.246 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12, KR | 0.65 | 55.0 | 3.88e-01 | 89.0% | 41.1% |
| 4974380 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.65 | 56.0 | 5.45e-01 | 90.0% | 94.7% |
| 4012868 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 54.0 | 4.62e-01 | 88.0% | 73.0% |
| 4304168 | 101.1.2.811 ↗ | alpha arrays › HTH › HTH › winged helix domain › Methyltransf_12 | 0.65 | 55.0 | 4.54e-01 | 89.0% | 69.6% |
| 4930323 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.64 | 55.0 | 5.44e-01 | 89.5% | 97.3% |
| 1891445 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.64 | 54.0 | 4.95e-01 | 89.0% | 92.6% |
| 5048307 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.64 | 54.0 | 5.08e-01 | 88.5% | 93.6% |
| 4223065 | 2003.1.5.246 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12, KR | 0.64 | 54.0 | 3.93e-01 | 88.0% | 39.6% |
| 5054593 | 2007.1.16.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 | 0.63 | 29.0 | 4.31e-01 | 80.9% | 100.0% |
| 3259767 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.62 | 52.0 | 4.84e-01 | 87.1% | 94.1% |
| 4927846 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.62 | 52.0 | 5.23e-01 | 88.5% | 90.2% |
| 4935134 | 7573.1.1.3 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyl_synth | 0.61 | 38.0 | 4.45e-01 | 90.4% | 89.0% |
| 3966929 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.60 | 50.0 | 4.73e-01 | 88.5% | 94.8% |
| 4944217 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.60 | 40.0 | 4.52e-01 | 95.2% | 88.7% |
| 3467649 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.59 | 36.0 | 4.37e-01 | 86.1% | 92.6% |
| 4647294 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.58 | 49.0 | 4.06e-01 | 89.0% | 61.1% |
| 3617145 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.58 | 49.0 | 4.90e-01 | 88.0% | 93.0% |
| 4932130 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.58 | 34.0 | 4.25e-01 | 85.6% | 92.3% |
| 3742565 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.58 | 49.0 | 4.29e-01 | 88.5% | 88.9% |
| 3669524 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.58 | 37.0 | 3.75e-01 | 86.1% | 62.4% |
| 2329746 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.58 | 48.0 | 4.48e-01 | 88.5% | 87.9% |
| 4146752 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.58 | 52.0 | 4.56e-01 | 96.2% | 91.8% |
| 4970058 | 7584.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins | 0.57 | 38.0 | 3.75e-01 | 95.2% | 60.9% |
| 4456403 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 34.0 | 3.62e-01 | 83.3% | 65.4% |
| 3955321 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 38.0 | 3.92e-01 | 85.6% | 70.8% |
| 3937308 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 38.0 | 3.48e-01 | 95.2% | 50.9% |
| 3386093 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.56 | 34.0 | 4.18e-01 | 86.6% | 94.6% |
| 3056597 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.56 | 33.0 | 4.15e-01 | 86.1% | 96.0% |
| 3766342 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 36.0 | 3.43e-01 | 85.6% | 54.6% |
| 4324645 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.55 | 33.0 | 4.07e-01 | 86.6% | 93.8% |
| 3837802 | 2003.1.5.185 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF28720 | 0.55 | 39.0 | 4.44e-01 | 95.7% | 94.4% |
| 3722264 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 37.0 | 3.39e-01 | 95.2% | 51.5% |
| 3630392 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.55 | 33.0 | 4.04e-01 | 85.6% | 93.2% |
| 5046949 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.54 | 33.0 | 4.05e-01 | 87.6% | 96.9% |
| 4054996 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.53 | 40.0 | 4.34e-01 | 95.7% | 93.5% |
| 4874522 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.53 | 40.0 | 4.18e-01 | 90.9% | 83.4% |
| 2330444 | 292.2.1.15 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › PF29923 | 0.53 | 34.0 | 4.07e-01 | 94.3% | 100.0% |
| 3600856 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.53 | 32.0 | 3.94e-01 | 86.1% | 93.3% |
| 4962362 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.53 | 41.0 | 4.28e-01 | 90.9% | 87.9% |
| 3958829 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 40.0 | 4.02e-01 | 94.7% | 75.5% |
| 3955469 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.53 | 40.0 | 4.20e-01 | 91.9% | 87.6% |
| 3960576 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.51 | 39.0 | 4.21e-01 | 95.2% | 92.2% |
| 3394623 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.51 | 39.0 | 3.98e-01 | 100.0% | 79.5% |
| 3739788 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.51 | 34.0 | 3.97e-01 | 82.3% | 94.6% |
| 3405953 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 21.0 | 2.78e-01 | 86.6% | 68.6% |
| 3638719 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.51 | 37.0 | 4.09e-01 | 88.0% | 92.9% |
| 3266091 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.51 | 44.0 | 4.32e-01 | 98.1% | 85.1% |
| 3582935 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.50 | 33.0 | 3.85e-01 | 96.2% | 94.5% |
| 2417203 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.50 | 40.0 | 3.97e-01 | 94.7% | 80.1% |
D2
high
residues 347-418
Domain cluster:
rep: methyltransferase__YP_004300299__Fig_fleck-associated_virus__548908__D280-348
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01660.23 best | Vmethyltransf | 27.4 | 2.50e-06 | 70.8% | 17.0% |
D3
high
residues 757-892
Domain cluster:
rep: papain-like_protease__YP_004300300__Fig_fleck-associated_virus__548908__D76-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05381.19 best | Peptidase_C21 | 81.4 | 8.70e-23 | 72.8% | 88.3% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5lw5A00 | 3.90.70.100 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Tymovirus endopeptidases | 0.93 | 88.0 | 8.62e-01 | 100.0% | 91.7% |
| 7pl7A01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.81 | 57.0 | 5.51e-01 | 72.1% | 82.9% |
| 3by4A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.79 | 56.0 | 5.07e-01 | 72.1% | 64.5% |
| 4bouA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.78 | 55.0 | 5.46e-01 | 72.1% | 81.6% |
| 6w9rB01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.78 | 55.0 | 5.17e-01 | 72.1% | 92.5% |
| 4boqA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.77 | 54.0 | 4.93e-01 | 72.1% | 66.3% |
| 4bopB00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.77 | 54.0 | 5.22e-01 | 72.1% | 80.0% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.76 | 53.0 | 5.15e-01 | 72.1% | 79.3% |
| 5jzeA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.65 | 55.0 | 5.20e-01 | 88.2% | 91.8% |
| 3phuA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.65 | 55.0 | 5.21e-01 | 89.0% | 89.9% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.56 | 32.0 | 4.06e-01 | 71.3% | 97.5% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2770413 | 219.1.1.29 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C21 | 0.94 | 86.0 | 8.39e-01 | 94.1% | 87.1% |
| 4881140 | 219.1.1.29 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C21 | 0.94 | 89.0 | 8.67e-01 | 100.0% | 91.7% |
| 3729552 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.82 | 58.0 | 5.56e-01 | 72.1% | 84.7% |
| 4027936 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.81 | 57.0 | 4.95e-01 | 72.1% | 84.0% |
| 3786918 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.81 | 57.0 | 5.36e-01 | 72.1% | 84.0% |
| 3741412 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.81 | 57.0 | 5.45e-01 | 72.1% | 82.6% |
| 3522626 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.81 | 57.0 | 5.06e-01 | 72.1% | 69.2% |
| 3270187 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.80 | 57.0 | 5.34e-01 | 72.1% | 83.1% |
| 3784827 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.79 | 56.0 | 4.92e-01 | 72.1% | 62.6% |
| 3248305 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.79 | 56.0 | 5.25e-01 | 72.1% | 78.1% |
| 4022826 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.78 | 55.0 | 5.08e-01 | 72.1% | 64.7% |
| 3763030 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.78 | 55.0 | 4.72e-01 | 72.1% | 56.1% |
| 3595522 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.78 | 55.0 | 5.34e-01 | 72.1% | 76.7% |
| 3993036 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.78 | 55.0 | 5.58e-01 | 72.1% | 83.7% |
| 4030106 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.78 | 55.0 | 5.15e-01 | 72.1% | 69.9% |
| 3493239 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.78 | 55.0 | 5.20e-01 | 72.1% | 74.7% |
| 3664077 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.78 | 55.0 | 4.93e-01 | 72.1% | 68.3% |
| 3637671 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.77 | 55.0 | 4.75e-01 | 72.1% | 76.4% |
| 3909949 | 219.1.1.56 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C101 | 0.77 | 55.0 | 4.16e-01 | 72.1% | 74.5% |
| 3697095 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.77 | 54.0 | 4.94e-01 | 72.1% | 64.0% |
| 3869291 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.77 | 54.0 | 4.94e-01 | 72.1% | 64.0% |
| 3220404 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.76 | 54.0 | 4.96e-01 | 72.1% | 67.1% |
| 3401495 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.76 | 54.0 | 5.03e-01 | 72.1% | 67.9% |
| 3656055 | 219.1.1.48 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 | 0.76 | 53.0 | 4.09e-01 | 72.1% | 74.3% |
| 3897776 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.75 | 53.0 | 4.31e-01 | 72.1% | 47.5% |
| 3840704 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.75 | 53.0 | 4.66e-01 | 72.1% | 58.0% |
| 3621465 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.74 | 52.0 | 4.66e-01 | 72.1% | 70.3% |
| 3203651 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 50.0 | 4.49e-01 | 70.6% | 77.3% |
| 3928738 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 44.0 | 4.74e-01 | 71.3% | 94.8% |
| 5046286 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.58 | 42.0 | 3.54e-01 | 73.5% | 63.3% |
D4
high
residues 906-1090
Domain cluster:
rep: p39__YP_004928123__Hibiscus_green_spot_virus_2__1513278__D5-179
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01443.25 best | Viral_helicase1 | 97.6 | 1.40e-27 | 56.8% | 43.0% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zpaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 46.0 | 5.34e-01 | 99.5% | 76.5% |
| 2gk6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 61.0 | 5.30e-01 | 85.9% | 86.4% |
| 4b3fX01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 60.0 | 4.88e-01 | 85.9% | 89.2% |
| 3e1sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 55.0 | 5.28e-01 | 100.0% | 70.3% |
| 1w4rA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 44.0 | 5.21e-01 | 100.0% | 89.4% |
| 2fwrA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 52.0 | 5.34e-01 | 94.1% | 79.2% |
| 6jytA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 53.0 | 5.61e-01 | 94.6% | 87.4% |
| 6jdrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 46.0 | 5.24e-01 | 84.3% | 89.5% |
| 3upuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 51.0 | 5.29e-01 | 94.6% | 83.5% |
| 5rl9B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 47.0 | 5.20e-01 | 85.4% | 89.9% |
| 7clgB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 47.0 | 5.17e-01 | 93.0% | 89.6% |
| 3dmnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 48.0 | 5.12e-01 | 87.0% | 87.6% |
| 3upuA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 43.0 | 5.14e-01 | 82.7% | 97.7% |
| 4idhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 51.0 | 4.88e-01 | 94.1% | 73.1% |
| 3b85A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 49.0 | 4.96e-01 | 91.9% | 80.2% |
| 4a8jB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 43.0 | 4.08e-01 | 97.3% | 58.6% |
| 2b8tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 41.0 | 4.75e-01 | 100.0% | 89.9% |
| 1w36D02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 54.0 | 4.94e-01 | 100.0% | 72.2% |
| 7r7jA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 49.0 | 4.91e-01 | 93.5% | 81.7% |
| 5lklB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 45.0 | 5.05e-01 | 88.1% | 100.0% |
| 1ofuX00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 38.0 | 4.61e-01 | 96.8% | 100.0% |
| 5eanA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 4.93e-01 | 100.0% | 81.2% |
| 3nhvC01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.59 | 34.0 | 4.02e-01 | 84.9% | 83.3% |
| 8jx6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 53.0 | 5.18e-01 | 94.1% | 87.0% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.58 | 21.0 | 3.19e-01 | 75.7% | 75.0% |
| 1rifA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 53.0 | 5.25e-01 | 98.4% | 91.7% |
| 6x50A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 54.0 | 5.14e-01 | 99.5% | 86.7% |
| 4nl4H03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 49.0 | 4.85e-01 | 93.5% | 84.7% |
| 1pjrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 51.0 | 5.01e-01 | 94.6% | 87.6% |
| 1g19A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 47.0 | 4.39e-01 | 100.0% | 71.4% |
| 1w36D03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 47.0 | 4.90e-01 | 87.6% | 97.7% |
| 1iqpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 39.0 | 4.12e-01 | 94.6% | 78.0% |
| 8alzB05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 50.0 | 4.81e-01 | 93.5% | 89.3% |
| 1w36B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 51.0 | 4.56e-01 | 95.7% | 90.7% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.55 | 23.0 | 3.27e-01 | 77.8% | 81.6% |
| 1vecA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 49.0 | 4.78e-01 | 95.7% | 89.8% |
| 2o57A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 37.0 | 3.94e-01 | 93.5% | 81.8% |
| 7xc2A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 39.0 | 4.08e-01 | 93.5% | 87.1% |
| 2ht1A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 47.0 | 4.39e-01 | 100.0% | 84.4% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3735988 | 2004.1.1.522 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_19 | 0.76 | 63.0 | 4.82e-01 | 85.4% | 87.4% |
| 3240265 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.76 | 64.0 | 5.20e-01 | 85.9% | 88.3% |
| 3924486 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.76 | 63.0 | 4.52e-01 | 85.4% | 87.8% |
| 3695651 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.76 | 63.0 | 4.84e-01 | 85.4% | 88.9% |
| 3724988 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.75 | 62.0 | 4.84e-01 | 85.4% | 80.3% |
| 3788919 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.75 | 61.0 | 4.84e-01 | 84.3% | 87.1% |
| 3690329 | 2004.1.1.473 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII, AAA_11 | 0.75 | 62.0 | 4.82e-01 | 85.4% | 81.4% |
| 3412180 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.74 | 61.0 | 4.37e-01 | 85.9% | 58.0% |
| 3185865 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.74 | 60.0 | 4.56e-01 | 84.9% | 80.7% |
| 3208390 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.74 | 60.0 | 4.52e-01 | 84.9% | 84.3% |
| 3936662 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.73 | 60.0 | 4.73e-01 | 84.9% | 89.2% |
| 3639517 | 2004.1.1.768 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_12, AAA_19 | 0.73 | 60.0 | 3.97e-01 | 85.4% | 45.3% |
| 3752894 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.72 | 60.0 | 4.74e-01 | 85.4% | 78.0% |
| 3397089 | 2004.1.1.920 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, AAA_11, AAA_12 | 0.72 | 59.0 | 4.06e-01 | 85.4% | 49.4% |
| 3302917 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.72 | 60.0 | 4.87e-01 | 86.5% | 89.7% |
| 4951117 | 2004.1.1.205 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 | 0.72 | 59.0 | 4.86e-01 | 84.3% | 87.4% |
| 3208271 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.72 | 54.0 | 3.62e-01 | 77.3% | 95.2% |
| 3921055 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.72 | 60.0 | 4.65e-01 | 85.9% | 86.5% |
| 3684643 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.72 | 59.0 | 4.50e-01 | 85.9% | 79.3% |
| 3415427 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.72 | 59.0 | 4.66e-01 | 85.9% | 76.7% |
| 5024275 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.71 | 59.0 | 4.63e-01 | 85.9% | 88.5% |
| 3399811 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.71 | 58.0 | 4.92e-01 | 84.9% | 84.8% |
| None | — | 0.71 | 59.0 | 4.75e-01 | 86.5% | 76.4% | |
| 1175748 | 2004.1.1.205 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 | 0.71 | 55.0 | 5.55e-01 | 100.0% | 78.8% |
| 3253942 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.71 | 59.0 | 4.75e-01 | 86.5% | 80.6% |
| 3342879 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.71 | 59.0 | 4.51e-01 | 85.9% | 76.9% |
| None | — | 0.70 | 58.0 | 4.85e-01 | 85.4% | 79.3% | |
| 3914297 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.70 | 58.0 | 4.67e-01 | 85.9% | 76.4% |
| 3795843 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.70 | 57.0 | 4.77e-01 | 84.9% | 86.6% |
| 3908064 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.70 | 58.0 | 4.67e-01 | 85.9% | 76.7% |
| 3185851 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 54.0 | 3.70e-01 | 83.8% | 67.2% |
| 3589167 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.67 | 47.0 | 5.36e-01 | 84.3% | 95.0% |
| 2092590 | 2004.1.1.205 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 | 0.66 | 56.0 | 5.38e-01 | 100.0% | 77.9% |
| 4182860 | 2004.1.1.161 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N | 0.66 | 43.0 | 4.59e-01 | 94.1% | 73.3% |
| 4006300 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.66 | 53.0 | 3.55e-01 | 82.7% | 91.2% |
| 2527340 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.66 | 56.0 | 5.35e-01 | 100.0% | 77.9% |
| 3945696 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.66 | 52.0 | 4.64e-01 | 94.6% | 59.2% |
| 3567663 | 2004.1.1.185 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 | 0.66 | 53.0 | 3.68e-01 | 82.7% | 69.4% |
| 4044381 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.66 | 53.0 | 3.37e-01 | 84.3% | 91.4% |
| 4266784 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.66 | 52.0 | 3.52e-01 | 82.7% | 93.3% |
| 3277953 | 2004.1.1.549 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Exonuc_V_gamma, PF27451 | 0.65 | 53.0 | 3.41e-01 | 84.3% | 91.7% |
| 4030474 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.65 | 52.0 | 3.65e-01 | 82.7% | 90.9% |
| 4055952 | 2004.1.1.226 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N | 0.65 | 52.0 | 3.46e-01 | 84.3% | 90.0% |
| None | — | 0.64 | 55.0 | 5.03e-01 | 100.0% | 70.9% | |
| 4953117 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.64 | 51.0 | 5.25e-01 | 93.5% | 86.3% |
| 4950774 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.64 | 52.0 | 3.50e-01 | 85.4% | 89.5% |
| 4227542 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.64 | 52.0 | 3.50e-01 | 85.4% | 91.6% |
| 3289802 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.63 | 51.0 | 3.55e-01 | 82.7% | 67.6% |
| 4302341 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.63 | 51.0 | 3.21e-01 | 84.3% | 92.7% |
| 3589264 | 2004.1.1.193 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 | 0.62 | 55.0 | 4.75e-01 | 100.0% | 63.4% |
| 3558535 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 51.0 | 5.22e-01 | 85.9% | 97.2% |
| 4046976 | 2004.1.1.193 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 | 0.62 | 56.0 | 4.93e-01 | 100.0% | 67.8% |
| 4032496 | 2004.1.1.205 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 | 0.62 | 54.0 | 4.90e-01 | 100.0% | 69.0% |
| 3286906 | 2004.1.1.205 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 | 0.61 | 55.0 | 5.25e-01 | 100.0% | 81.4% |
| 3287999 | 2004.1.1.193 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 | 0.61 | 55.0 | 4.80e-01 | 100.0% | 64.8% |
| 4964810 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.61 | 49.0 | 3.13e-01 | 84.3% | 91.5% |
| 3965541 | 2004.1.1.522 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_19 | 0.61 | 55.0 | 4.72e-01 | 100.0% | 63.6% |
| 3760903 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.60 | 49.0 | 5.06e-01 | 87.0% | 97.8% |
| 5005831 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.59 | 50.0 | 4.98e-01 | 87.6% | 88.4% |
| 4970836 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 53.0 | 5.13e-01 | 97.3% | 84.9% |
| 4994367 | 2004.1.1.123 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD | 0.59 | 51.0 | 5.01e-01 | 97.3% | 84.0% |
| 3970064 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 55.0 | 4.84e-01 | 100.0% | 70.0% |
| 3163821 | 2004.1.1.193 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 | 0.59 | 54.0 | 4.81e-01 | 100.0% | 70.6% |
| 3777175 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.58 | 48.0 | 5.07e-01 | 87.6% | 95.3% |
| 4927000 | 2008.1.1.217 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UvrD-helicase | 0.57 | 52.0 | 3.10e-01 | 93.5% | 28.5% |
| 3412648 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.57 | 43.0 | 3.11e-01 | 93.5% | 28.4% |
| 4073617 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.57 | 51.0 | 4.54e-01 | 93.5% | 82.8% |
| 4972258 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 41.0 | 4.30e-01 | 93.0% | 80.6% |
| 3952349 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.56 | 51.0 | 3.24e-01 | 94.1% | 36.9% |
| 4888963 | 2004.1.1.161 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N | 0.56 | 41.0 | 3.73e-01 | 92.4% | 56.4% |
| 3589168 | 2004.1.1.193 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 | 0.56 | 51.0 | 4.50e-01 | 94.1% | 83.9% |
| 3682236 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.56 | 46.0 | 4.85e-01 | 87.0% | 93.5% |
| 3970065 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 46.0 | 4.87e-01 | 87.6% | 95.8% |
| 3591718 | 2004.1.1.101 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MeaB | 0.56 | 41.0 | 3.42e-01 | 78.9% | 42.4% |
| 5000494 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.56 | 52.0 | 4.80e-01 | 98.9% | 86.1% |
| 4021164 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 39.0 | 4.17e-01 | 91.9% | 81.9% |
| 3598241 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 51.0 | 4.27e-01 | 97.8% | 81.3% |
| 3899696 | 2004.1.1.161 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N | 0.52 | 43.0 | 4.14e-01 | 92.4% | 75.8% |
| 3367588 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.52 | 39.0 | 4.31e-01 | 96.2% | 95.3% |
| 3511279 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 47.0 | 4.66e-01 | 100.0% | 91.8% |
| 4031854 | 2004.1.1.68 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 | 0.51 | 38.0 | 3.48e-01 | 95.1% | 58.2% |
D5
high
residues 1125-1258
Domain cluster:
rep: aot2015-NO19_SRR1761693_USA_trim_clean_trim_clean_scaffold_5_curated_closed_complete_reversed_prodigal-single.1__X__X__00231__D500-555_733-767_803-875
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01443.25 best | Viral_helicase1 | 32.6 | 1.10e-07 | 68.7% | 35.5% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vkwA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 67.0 | 6.46e-01 | 87.3% | 88.5% |
| 6jimB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 66.0 | 6.68e-01 | 88.1% | 94.7% |
| 3jb9X01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 63.0 | 5.18e-01 | 86.6% | 80.8% |
| 5rl9B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 62.0 | 6.03e-01 | 85.8% | 96.0% |
| 4ceiB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 53.0 | 4.80e-01 | 75.4% | 95.0% |
| 1pjrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 52.0 | 4.48e-01 | 75.4% | 85.6% |
| 1rifA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 50.0 | 4.39e-01 | 72.4% | 78.6% |
| 4idhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 50.0 | 4.32e-01 | 75.4% | 73.1% |
| 3rc3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 54.0 | 5.15e-01 | 83.6% | 93.7% |
| 3i5xA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 54.0 | 4.27e-01 | 82.1% | 63.8% |
| 6jimB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 48.0 | 4.72e-01 | 72.4% | 86.0% |
| 1yksA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 53.0 | 4.74e-01 | 81.3% | 97.2% |
| 3b85A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 49.0 | 4.33e-01 | 74.6% | 75.9% |
| 3mwyW03 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.67 | 50.0 | 3.95e-01 | 77.6% | 76.5% |
| 3e1sA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 59.0 | 5.86e-01 | 94.0% | 96.5% |
| 4xjxA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 48.0 | 4.30e-01 | 75.4% | 85.3% |
| 1w36D03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 58.0 | 5.27e-01 | 92.5% | 100.0% |
| 2ip2A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 45.0 | 3.66e-01 | 70.1% | 63.4% |
| 1l8qA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 47.0 | 4.41e-01 | 76.1% | 76.4% |
| 2orwB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 46.0 | 4.76e-01 | 74.6% | 96.9% |
| 1mzvA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 45.0 | 3.84e-01 | 73.9% | 85.2% |
| 3i9fB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 44.0 | 4.13e-01 | 73.9% | 89.3% |
| 5bq5B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 45.0 | 4.06e-01 | 76.9% | 70.1% |
| 1jqlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 44.0 | 4.33e-01 | 75.4% | 83.6% |
| 2b3tA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 43.0 | 3.84e-01 | 74.6% | 82.3% |
| 2qgzA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 43.0 | 3.91e-01 | 76.1% | 68.4% |
| 4a8jB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 42.0 | 3.61e-01 | 75.4% | 82.7% |
| 2d4aD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 40.0 | 3.99e-01 | 70.9% | 88.7% |
| 2iw3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 42.0 | 3.54e-01 | 76.9% | 85.5% |
| 7xc2A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 41.0 | 3.87e-01 | 76.9% | 81.2% |
| 4lg1B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 44.0 | 3.83e-01 | 85.1% | 85.0% |
| 3v4cA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.55 | 40.0 | 3.60e-01 | 76.1% | 92.7% |
| 3f4nC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 42.0 | 3.49e-01 | 84.3% | 100.0% |
| 2h9aA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.53 | 42.0 | 3.44e-01 | 85.8% | 90.7% |
| 3lm7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 42.0 | 3.54e-01 | 88.1% | 97.6% |
| 3fokA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 42.0 | 3.30e-01 | 88.1% | 87.5% |
| 3wajA02 | 3.40.50.12610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 35.0 | 3.26e-01 | 70.1% | 89.9% |
| 4g1vA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.50 | 35.0 | 3.52e-01 | 71.6% | 83.1% |
| 2agkA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 40.0 | 3.41e-01 | 86.6% | 100.0% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3432662 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.79 | 65.0 | 5.58e-01 | 86.6% | 87.8% |
| 2095415 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.76 | 62.0 | 5.85e-01 | 85.8% | 89.4% |
| 3682367 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.76 | 54.0 | 5.47e-01 | 73.1% | 97.8% |
| 3561762 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.76 | 54.0 | 4.77e-01 | 73.1% | 91.6% |
| None | — | 0.74 | 58.0 | 5.64e-01 | 80.6% | 99.3% | |
| 3658525 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.73 | 54.0 | 5.36e-01 | 76.1% | 95.7% |
| 3601738 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 60.0 | 6.24e-01 | 100.0% | 94.4% |
| 4165355 | 2004.1.1.494 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 | 0.71 | 58.0 | 3.68e-01 | 86.6% | 59.5% |
| 3719002 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.70 | 62.0 | 6.22e-01 | 100.0% | 91.9% |
| 4986882 | 2004.1.1.161 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N | 0.70 | 51.0 | 4.61e-01 | 76.9% | 80.0% |
| 3598241 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 50.0 | 3.84e-01 | 75.4% | 61.3% |
| 3929438 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.69 | 51.0 | 4.02e-01 | 76.9% | 56.7% |
| 3378769 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.68 | 51.0 | 3.98e-01 | 76.9% | 63.6% |
| 3473985 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.68 | 51.0 | 4.12e-01 | 77.6% | 65.2% |
| 4530835 | 2004.1.1.226 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N | 0.68 | 49.0 | 3.87e-01 | 74.6% | 91.6% |
| 1889033 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.68 | 59.0 | 4.68e-01 | 91.8% | 96.1% |
| 3603695 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.68 | 60.0 | 5.30e-01 | 92.5% | 96.8% |
| 3735628 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.68 | 51.0 | 3.68e-01 | 78.4% | 54.1% |
| 1346264 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 50.0 | 3.99e-01 | 77.6% | 72.6% |
| 3684643 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.67 | 55.0 | 3.88e-01 | 86.6% | 73.8% |
| 3596401 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 59.0 | 5.93e-01 | 100.0% | 91.9% |
| 3676955 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.67 | 62.0 | 5.61e-01 | 97.0% | 97.1% |
| 4953125 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.67 | 49.0 | 4.28e-01 | 74.6% | 84.1% |
| 3192285 | 2004.1.1.428 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 | 0.67 | 56.0 | 3.59e-01 | 89.6% | 69.4% |
| 3278699 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.67 | 62.0 | 5.90e-01 | 99.3% | 93.5% |
| 4402315 | 2004.1.1.123 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD | 0.66 | 48.0 | 4.35e-01 | 76.1% | 65.4% |
| 3978023 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.66 | 59.0 | 5.39e-01 | 94.0% | 97.6% |
| 3807611 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 61.0 | 5.77e-01 | 97.8% | 98.1% |
| 3680771 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.66 | 60.0 | 4.69e-01 | 94.8% | 64.3% |
| 3874017 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.66 | 58.0 | 5.18e-01 | 92.5% | 98.3% |
| 3656784 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.66 | 61.0 | 5.44e-01 | 97.8% | 92.8% |
| 5001121 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.66 | 47.0 | 3.85e-01 | 74.6% | 86.8% |
| 3592083 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.65 | 54.0 | 4.06e-01 | 88.1% | 81.6% |
| 3777175 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.65 | 58.0 | 5.35e-01 | 94.8% | 100.0% |
| 3487068 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 52.0 | 4.02e-01 | 84.3% | 54.8% |
| 3786748 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.65 | 52.0 | 4.13e-01 | 84.3% | 65.8% |
| 4966084 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.64 | 55.0 | 4.72e-01 | 91.8% | 89.5% |
| 3740191 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.64 | 52.0 | 3.80e-01 | 87.3% | 69.9% |
| 4986472 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 47.0 | 4.28e-01 | 76.1% | 95.4% |
| 4982497 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 46.0 | 4.09e-01 | 76.1% | 88.7% |
| 3362146 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.63 | 58.0 | 4.97e-01 | 97.0% | 77.0% |
| 3956933 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.63 | 52.0 | 4.54e-01 | 88.1% | 89.0% |
| 4999687 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 46.0 | 4.12e-01 | 76.1% | 94.1% |
| 3454343 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 41.0 | 4.23e-01 | 70.9% | 69.2% |
| 5030303 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.62 | 44.0 | 4.01e-01 | 73.1% | 78.3% |
| 3183795 | 2003.1.7.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B | 0.62 | 43.0 | 3.53e-01 | 70.1% | 82.9% |
| 5027609 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.60 | 44.0 | 3.98e-01 | 76.9% | 74.1% |
| 4961851 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.60 | 44.0 | 4.04e-01 | 76.9% | 79.4% |
| 3282005 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.59 | 42.0 | 3.43e-01 | 73.9% | 60.0% |
| 3278595 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.56 | 41.0 | 3.84e-01 | 75.4% | 81.2% |
| 3955788 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 40.0 | 3.88e-01 | 74.6% | 81.3% |
| 3436764 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.56 | 40.0 | 3.59e-01 | 75.4% | 67.0% |
| 4952559 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.55 | 40.0 | 3.22e-01 | 76.1% | 47.6% |
| 3464879 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.54 | 39.0 | 3.66e-01 | 76.1% | 81.7% |
| 4954697 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.54 | 39.0 | 3.15e-01 | 75.4% | 48.1% |
| 3442635 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.53 | 43.0 | 3.90e-01 | 85.8% | 77.2% |
| 4968277 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.53 | 38.0 | 3.37e-01 | 75.4% | 61.4% |
| 1282126 | 2002.1.1.147 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › KDGP_aldolase | 0.53 | 43.0 | 3.57e-01 | 88.1% | 98.4% |
| 3307789 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.53 | 38.0 | 3.84e-01 | 76.1% | 74.1% |
| 5038612 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.51 | 38.0 | 3.14e-01 | 79.1% | 88.2% |
| 3599511 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.50 | 36.0 | 3.04e-01 | 75.4% | 65.9% |
D6
medium
residues 76-143
Domain cluster:
rep: methyltransferase__YP_004300299__Fig_fleck-associated_virus__548908__D1-65