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minor_coat_protein

Euk-Vir

Pistachio_ampelovirus_A

minor_coat_protein__YP_010086805__Pistachio_ampelovirus_A__2093224

Identity

Accession:
YP_010086805 ↗
Protein ID:
minor_coat_protein
Kingdom:
euk

Quality

46.4 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Ampelovirus› Pistachio_ampelovirus_A

TaxID: 2093224

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 368-545
PDB
Domain cluster: rep: unnamed_protein_product__YP_003002362__Lettuce_chlorosis_virus__642478__D74-228
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01785.23 best Closter_coat 43.2 3.90e-11 98.9% 79.4%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b4yA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 33.0 3.56e-01 89.9% 70.5%
4iduB01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.50 32.0 3.75e-01 86.5% 89.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4833627 3143.1.1.2 ↗ alpha complex topology › Rift Valley fever virus nucleocapsid protein-related › Rift Valley fever virus nucleocapsid protein-related › Papaya mosaic virus capsid protein › Poty_coat 0.80 56.0 5.93e-01 83.1% 79.0%
4833628 3143.1.1.2 ↗ alpha complex topology › Rift Valley fever virus nucleocapsid protein-related › Rift Valley fever virus nucleocapsid protein-related › Papaya mosaic virus capsid protein › Poty_coat 0.77 57.0 6.12e-01 82.6% 86.6%
3336463 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 23.0 3.25e-01 75.8% 92.3%