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minor_nucleoprotein
Euk-VirBombali_ebolavirus
minor_nucleoprotein__YP_009513280__Bombali_ebolavirus__2010960
Identity
- Accession:
- YP_009513280 ↗
- Protein ID:
- minor_nucleoprotein
- Kingdom:
- euk
Quality
57.4
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Filoviridae›
Orthoebolavirus›
Bombali_virus
TaxID: 2010960
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 84-129_152-259
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11507.14 best | Transcript_VP30 | 170.9 | 1.90e-50 | 69.5% | 80.9% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.98 | 68.0 | 7.42e-01 | 72.1% | 82.6% |
| 5t3wA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.95 | 66.0 | 7.08e-01 | 72.1% | 79.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1888148 | 3432.1.1.1 ↗ | alpha bundles › Minor nucleoprotein VP30 C-terminal domain › Minor nucleoprotein VP30 C-terminal domain › Minor nucleoprotein VP30 C-terminal domain › Transcript_VP30 | 0.98 | 68.0 | 7.22e-01 | 78.6% | 78.4% |
| 2605083 | 3432.1.1.1 ↗ | alpha bundles › Minor nucleoprotein VP30 C-terminal domain › Minor nucleoprotein VP30 C-terminal domain › Minor nucleoprotein VP30 C-terminal domain › Transcript_VP30 | 0.95 | 67.0 | 7.38e-01 | 72.1% | 86.0% |
| 3736783 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 39.0 | 3.43e-01 | 76.0% | 84.9% |