minor_structural_protein

Euk-Vir

Ungulate_tetraparvovirus_1

minor_structural_protein__YP_009175069__Ungulate_tetraparvovirus_1__1511914

Identity

64.1 mean pLDDT

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Tetraparvovirus› Tetraparvovirus_ungulate1

TaxID: 1511914

View cluster (9 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-28_43-191

PDB

Domain cluster: rep: structural_protein__YP_009507389__Parvovirus_YX-2010_CHN__754189__D44-198

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2wb7A03	1.20.120.870	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain	0.59	42.0	4.62e-01	80.5%	89.0%
1zzpA00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.54	35.0	4.12e-01	75.0%	97.2%
2jswA00	1.20.1410.10	Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain	0.53	45.0	4.31e-01	90.9%	92.1%
4m70I00	1.20.5.4130	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.52	33.0	3.86e-01	76.8%	93.5%
1u5kA02	1.20.1440.120	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Recombination protein O, C-terminal domain	0.52	36.0	4.06e-01	99.4%	93.6%
1dowA00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.51	37.0	3.49e-01	75.0%	90.2%
1h0oA00	1.10.620.20	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A	0.51	39.0	3.27e-01	79.9%	65.6%
7aalA01	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.50	35.0	2.92e-01	70.7%	83.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4976939	3291.1.1.1 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7	0.54	44.0	4.49e-01	87.8%	86.1%

D2 high residues 250-323

PDB

D3 high residues 400-601_829-878

PDB

Domain cluster: rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00740.24 best	VP1_2	124.0	9.70e-36	73.0%	30.7%