←Back to structures

morn_repeat_domain

Euk-Vir

Pandoravirus_salinus

morn_repeat_domain__YP_008437271__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008437271 ↗
Protein ID:
morn_repeat_domain
Kingdom:
euk

Quality

58.3 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-91
PDB
Domain cluster: rep: hypothetical_protein_MEL_135__YP_009094636__Melbournevirus__1560514__D6-67
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 55.1 7.10e-15 68.8% 87.2%
PF00646.39 F-box 32.3 8.90e-08 62.3% 86.1%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4i6jB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.90 52.0 6.20e-01 90.2% 85.7%
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.89 73.0 6.42e-01 100.0% 62.1%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.85 76.0 6.41e-01 100.0% 78.0%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.74 64.0 5.77e-01 100.0% 89.8%
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.74 65.0 5.56e-01 100.0% 76.8%
2e31A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.72 57.0 5.73e-01 88.5% 85.5%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.65 61.0 3.90e-01 100.0% 27.8%
2lo6A00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 50.0 3.79e-01 93.4% 77.3%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.56 39.0 3.00e-01 75.4% 80.1%
2d3dA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.55 39.0 3.60e-01 77.0% 67.5%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 41.0 3.06e-01 90.2% 57.7%
6srbA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.50 43.0 3.59e-01 98.4% 92.7%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3261282 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 70.0 7.39e-01 82.0% 92.7%
3407033 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 82.0 7.58e-01 100.0% 86.7%
3810074 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.89 83.0 7.51e-01 100.0% 78.5%
3806475 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 83.0 7.64e-01 100.0% 82.7%
3726840 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 82.0 7.63e-01 100.0% 86.7%
3845951 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 82.0 7.25e-01 100.0% 77.6%
3879992 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 82.0 7.40e-01 100.0% 81.2%
3812115 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 81.0 7.55e-01 98.4% 94.5%
3363533 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 81.0 7.56e-01 100.0% 93.3%
3664299 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 82.0 6.94e-01 100.0% 81.1%
3652521 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 82.0 7.66e-01 100.0% 91.8%
3350782 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 80.0 4.95e-01 100.0% 21.2%
3617852 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 81.0 7.73e-01 100.0% 91.4%
3248494 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 75.0 7.38e-01 100.0% 86.2%
3762363 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 80.0 4.57e-01 100.0% 11.6%
3654886 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 80.0 7.45e-01 100.0% 84.0%
3446581 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 81.0 7.15e-01 100.0% 85.9%
3201568 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 71.0 6.78e-01 100.0% 75.7%
3666811 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 80.0 6.28e-01 100.0% 58.3%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 74.0 6.53e-01 91.8% 70.6%
3909942 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 80.0 6.43e-01 100.0% 57.3%
3613821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 78.0 7.39e-01 100.0% 84.3%
3770072 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 80.0 6.93e-01 100.0% 72.2%
3544730 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 79.0 6.85e-01 100.0% 74.4%
3300009 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 80.0 7.20e-01 100.0% 82.5%
3711287 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 77.0 6.36e-01 100.0% 56.7%
3355899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 80.0 7.05e-01 100.0% 90.6%
3301272 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 79.0 6.41e-01 100.0% 60.0%
3643181 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 80.0 7.38e-01 100.0% 82.7%
3646821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 79.0 7.32e-01 100.0% 88.0%
3812206 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 79.0 7.33e-01 100.0% 93.3%
3257387 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 79.0 7.00e-01 100.0% 76.5%
3664817 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 78.0 7.09e-01 100.0% 87.5%
3347843 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 78.0 7.11e-01 100.0% 87.5%
3925121 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 78.0 6.31e-01 100.0% 71.8%
3378208 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 77.0 5.00e-01 100.0% 28.2%
4545458 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 77.0 6.47e-01 100.0% 85.0%
3439461 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 76.0 7.47e-01 100.0% 90.8%
3726578 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 77.0 6.87e-01 100.0% 78.8%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 76.0 7.03e-01 100.0% 89.7%
3685535 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 77.0 7.01e-01 100.0% 88.7%
4019682 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 77.0 6.56e-01 100.0% 81.1%
3358453 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 77.0 7.30e-01 100.0% 85.7%
3308939 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 76.0 7.07e-01 100.0% 93.3%
3235397 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 69.0 6.96e-01 91.8% 90.0%
3742900 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 77.0 5.83e-01 100.0% 80.7%
3536855 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 77.0 6.56e-01 100.0% 86.3%
3188576 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 75.0 6.72e-01 100.0% 87.1%
3429995 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 76.0 7.11e-01 100.0% 82.2%
4023099 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 76.0 6.11e-01 100.0% 76.5%
3886321 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 77.0 6.96e-01 100.0% 83.7%
3803973 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 71.0 6.83e-01 93.4% 90.0%
4023603 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 76.0 7.19e-01 96.7% 87.1%
3631167 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 76.0 6.73e-01 100.0% 84.7%
3276040 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 69.0 6.54e-01 100.0% 77.1%
3575456 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 77.0 6.64e-01 100.0% 84.4%
3743076 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 75.0 6.40e-01 100.0% 89.5%
3194125 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 76.0 6.86e-01 100.0% 85.0%
3184741 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 74.0 6.05e-01 100.0% 87.3%
3821430 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 75.0 6.83e-01 100.0% 80.0%
3515309 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.82 67.0 3.96e-01 85.2% 34.9%
3902311 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 76.0 6.68e-01 100.0% 91.8%
3191118 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 75.0 6.19e-01 100.0% 59.2%
3651806 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.82 73.0 6.69e-01 100.0% 82.5%
3699732 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 73.0 7.02e-01 100.0% 95.7%
3648014 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 74.0 6.85e-01 100.0% 94.7%
3696138 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 73.0 6.28e-01 100.0% 78.9%
3485475 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 73.0 6.52e-01 100.0% 76.5%
4013644 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 74.0 6.44e-01 100.0% 84.4%
4040935 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 74.0 5.90e-01 100.0% 84.3%
2899589 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 72.0 6.75e-01 100.0% 85.1%
3726236 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 73.0 6.47e-01 100.0% 78.8%
3491937 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 73.0 6.38e-01 100.0% 85.6%
3861026 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 72.0 6.13e-01 100.0% 67.3%
3852694 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 61.0 3.98e-01 80.3% 46.7%
3698023 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 72.0 5.82e-01 100.0% 73.9%
3472074 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 71.0 6.14e-01 100.0% 70.5%
3568315 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.80 60.0 3.90e-01 80.3% 44.3%
3320433 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 71.0 7.15e-01 98.4% 98.3%
3187719 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 71.0 6.62e-01 100.0% 82.7%
3380116 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 71.0 6.86e-01 100.0% 88.2%
3256545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 63.0 6.22e-01 88.5% 87.7%
3731690 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 68.0 6.28e-01 100.0% 86.3%
4500280 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 71.0 6.30e-01 100.0% 74.1%
3209791 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 62.0 6.08e-01 86.9% 84.6%
3208443 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 69.0 5.75e-01 100.0% 78.1%
3176338 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 69.0 6.28e-01 100.0% 80.0%
4011985 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 67.0 5.89e-01 100.0% 82.2%
3810743 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.75 54.0 3.50e-01 75.4% 26.9%
3194725 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 67.0 5.97e-01 100.0% 83.5%
3715255 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 60.0 6.30e-01 93.4% 96.4%
3527636 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 64.0 5.75e-01 100.0% 79.8%
3595717 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 65.0 6.39e-01 100.0% 92.3%
3186415 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 66.0 5.92e-01 100.0% 83.5%
3738910 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 66.0 5.93e-01 100.0% 77.6%
3856479 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.73 61.0 3.59e-01 88.5% 24.5%
3691218 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 57.0 5.98e-01 85.2% 92.7%
3691114 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 60.0 5.66e-01 93.4% 98.7%
3303758 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.66 62.0 3.43e-01 100.0% 9.4%
D2 high residues 93-197
PDB
D3 medium residues 258-378
PDB
Domain cluster: rep: Morn_repeat_incomplete_domain_containing_protein__YP_009481695__Pandoravirus_neocaledonia__2107708__D142-169_190-302
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF02493.27 best MORN 13.2 9.40e-02 19.0% 100.0%
PF02493.27 MORN 31.5 1.40e-07 19.0% 95.7%
PF02493.27 MORN 17.8 3.30e-03 19.0% 95.7%
PF02493.27 MORN 19.9 7.30e-04 14.1% 69.6%