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movement_protein

Euk-Vir

Potato_virus_T

movement_protein__YP_002019749__Potato_virus_T__36403

Identity

Accession:
YP_002019749 ↗
Protein ID:
movement_protein
Kingdom:
euk

Quality

65.1 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Tymovirales› Betaflexiviridae› Tepovirus› Potato_virus_T

TaxID: 36403

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-229
PDB
Domain cluster: rep: movement_protein__YP_009551569__Tea_plant_line_pattern_virus__2419940__D19-222
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01107.24 best MP 66.0 4.70e-18 77.7% 67.0%
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.73 46.0 5.50e-01 79.5% 93.3%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.69 49.0 5.31e-01 80.4% 85.3%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 31.0 4.50e-01 74.1% 95.1%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 41.0 5.07e-01 70.5% 97.8%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 51.0 5.33e-01 78.1% 88.5%
1c8nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 50.0 5.14e-01 78.1% 90.0%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 50.0 5.09e-01 78.1% 91.9%
3zxaC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 49.0 5.35e-01 78.1% 91.5%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 51.0 4.72e-01 81.2% 83.9%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 49.0 5.41e-01 76.3% 97.8%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.65 42.0 5.05e-01 75.0% 96.1%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 49.0 5.05e-01 77.7% 89.4%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 55.0 4.90e-01 89.7% 95.5%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 54.0 4.88e-01 90.6% 94.8%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 50.0 5.11e-01 81.2% 97.2%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 46.0 5.28e-01 76.8% 98.2%
4devD01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 35.0 4.62e-01 71.4% 98.4%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 47.0 4.76e-01 78.6% 95.5%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 48.0 5.13e-01 81.2% 99.5%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 46.0 5.10e-01 80.8% 96.7%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 47.0 5.06e-01 80.4% 95.2%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 4.57e-01 84.8% 73.3%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 46.0 4.94e-01 81.2% 100.0%
1oh4A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 42.0 4.76e-01 75.0% 100.0%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 4.31e-01 93.3% 64.1%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 4.23e-01 91.1% 62.9%
3ptyA02 2.60.120.940 Mainly Beta › Sandwich › Jelly Rolls › EmbC, C-terminal domain, subdomain 2 0.57 34.0 3.75e-01 76.3% 72.5%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 51.0 4.91e-01 98.2% 96.9%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 4.39e-01 84.8% 80.5%
1g43A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.55 37.0 4.29e-01 74.6% 94.4%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 39.0 4.32e-01 78.6% 93.1%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 37.0 4.33e-01 82.6% 99.4%
1lnsA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 38.0 4.14e-01 72.3% 91.4%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 4.32e-01 79.0% 94.1%
2e26A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 35.0 3.67e-01 86.6% 74.2%
6xofA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.76e-01 78.1% 98.4%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3314257 10.32.1.193 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP 0.89 66.0 7.46e-01 78.6% 96.0%
3344591 10.2.1.81 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP 0.89 67.0 7.01e-01 80.8% 83.4%
3684706 10.32.1.240 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PNGaseA 0.70 42.0 5.34e-01 72.3% 100.0%
3270665 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.70 39.0 5.18e-01 73.2% 98.4%
2526957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.69 49.0 4.47e-01 70.5% 86.3%
3194674 10.2.1.72 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA 0.69 44.0 5.26e-01 86.6% 94.7%
152483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.68 48.0 4.44e-01 70.5% 84.3%
4180781 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.68 43.0 5.32e-01 75.4% 100.0%
3714782 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 42.0 5.21e-01 78.6% 96.6%
328688 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.67 51.0 5.33e-01 78.1% 88.5%
1409656 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.66 50.0 5.14e-01 78.1% 90.0%
289259 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.66 50.0 5.08e-01 78.1% 91.1%
1114663 10.2.1.22 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 0.66 54.0 4.73e-01 85.3% 87.6%
3075118 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.66 52.0 4.93e-01 81.2% 96.6%
4768609 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.65 52.0 4.83e-01 81.2% 96.3%
3451794 10.2.1.72 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA 0.65 46.0 5.29e-01 86.2% 98.8%
1758310 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.65 50.0 5.20e-01 78.1% 88.7%
3693261 10.2.1.72 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA 0.63 42.0 4.95e-01 75.9% 96.1%
1696117 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.63 44.0 4.82e-01 71.0% 96.2%
3282993 10.32.1.31 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.62 41.0 4.87e-01 90.2% 97.3%
4091603 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.61 45.0 4.75e-01 76.8% 89.8%
296002 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.60 47.0 5.08e-01 80.8% 95.8%
5006270 10.48.1.0 ↗ beta sandwiches › jelly-roll › Camelysin metallo-endopeptidase-like › Camelysin metallo-endopeptidase-like 0.60 42.0 4.81e-01 73.7% 94.7%
3914563 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.60 41.0 4.69e-01 77.7% 92.3%
3172636 543.1.1.7 ↗ few secondary structure elements › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Mid1 0.60 38.0 4.69e-01 71.9% 98.6%
3845898 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.59 45.0 4.81e-01 79.0% 88.5%
1211 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.59 48.0 4.57e-01 84.8% 73.3%
3307728 10.32.1.192 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.59 38.0 4.46e-01 83.9% 90.6%
3628597 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 40.0 4.58e-01 84.4% 94.4%
2389248 10.2.1.63 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MCP_V20_C 0.56 41.0 4.04e-01 72.8% 96.2%
4025788 4081.1.1.7 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.56 31.0 3.08e-01 75.9% 48.9%
378133 10.32.1.174 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Lipl32 0.55 42.0 4.12e-01 78.6% 88.3%
4028561 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 38.0 4.43e-01 72.3% 95.8%
3257261 4081.1.1.7 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.55 33.0 3.67e-01 71.9% 71.9%
3883198 10.32.1.77 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Reelin_subrepeat-B 0.54 39.0 4.20e-01 75.0% 84.1%
4324122 10.32.1.18 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.53 40.0 4.32e-01 75.9% 96.8%
3975541 11.1.5.58 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF1120 0.52 37.0 3.85e-01 70.5% 97.5%
1193 10.2.1.27 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Phage_G 0.52 40.0 4.32e-01 79.0% 94.1%
3923894 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 35.0 4.11e-01 70.1% 96.8%