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movement_protein
Euk-VirPrunus_virus_T
movement_protein__YP_009051685__Prunus_virus_T__1472425
Identity
- Accession:
- YP_009051685 ↗
- Protein ID:
- movement_protein
- Kingdom:
- euk
Quality
58.7
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Tymovirales›
Betaflexiviridae›
Tepovirus›
Prunus_virus_T
TaxID: 1472425
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-231
Domain cluster:
rep: movement_protein__YP_009551569__Tea_plant_line_pattern_virus__2419940__D19-222
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01107.24 best | MP | 53.5 | 3.30e-14 | 81.4% | 90.6% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.75 | 47.0 | 5.70e-01 | 79.2% | 93.3% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 52.0 | 5.47e-01 | 77.0% | 88.5% |
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 31.0 | 4.57e-01 | 73.5% | 95.1% |
| 3zxaC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 51.0 | 5.55e-01 | 77.4% | 92.1% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 50.0 | 5.59e-01 | 75.2% | 97.8% |
| 1c8nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 51.0 | 5.22e-01 | 77.4% | 90.9% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 56.0 | 5.02e-01 | 88.5% | 94.8% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 47.0 | 4.86e-01 | 72.1% | 77.0% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 47.0 | 4.59e-01 | 71.7% | 78.1% |
| 2id4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 40.0 | 5.06e-01 | 72.1% | 98.6% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 47.0 | 4.66e-01 | 71.7% | 77.4% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 51.0 | 5.24e-01 | 81.0% | 97.2% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 43.0 | 5.05e-01 | 73.0% | 95.7% |
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 49.0 | 4.20e-01 | 79.2% | 62.3% |
| 1df0A03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 37.0 | 4.82e-01 | 72.1% | 100.0% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 47.0 | 4.81e-01 | 78.3% | 95.0% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 49.0 | 4.71e-01 | 85.4% | 73.3% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 5.14e-01 | 78.8% | 96.7% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 5.02e-01 | 78.8% | 99.5% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 5.10e-01 | 80.1% | 95.8% |
| 1sfpA00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.60 | 31.0 | 4.21e-01 | 74.8% | 97.3% |
| 4kq7A01 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.60 | 41.0 | 4.80e-01 | 72.6% | 96.3% |
| 3ks7A01 | 2.60.120.1570 | Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain | 0.60 | 42.0 | 4.41e-01 | 71.7% | 100.0% |
| 1a6cA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 50.0 | 4.26e-01 | 91.2% | 63.8% |
| 4nreA01 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.57 | 27.0 | 3.58e-01 | 85.4% | 81.7% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 43.0 | 4.77e-01 | 80.1% | 100.0% |
| 1pgw200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 47.0 | 4.01e-01 | 89.4% | 59.5% |
| 1g43A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.55 | 37.0 | 4.28e-01 | 73.0% | 94.4% |
| 3iiiA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 38.0 | 4.25e-01 | 70.8% | 100.0% |
| 4n2oA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 4.17e-01 | 79.2% | 84.1% |
| 3ptyA02 | 2.60.120.940 | Mainly Beta › Sandwich › Jelly Rolls › EmbC, C-terminal domain, subdomain 2 | 0.54 | 32.0 | 3.59e-01 | 74.8% | 72.5% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 37.0 | 4.33e-01 | 70.4% | 100.0% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.53 | 26.0 | 3.61e-01 | 76.1% | 96.2% |
| 1f35A00 | 2.60.120.390 | Mainly Beta › Sandwich › Jelly Rolls › Olfactory marker | 0.52 | 37.0 | 4.25e-01 | 71.2% | 100.0% |
| 1m06G00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 4.33e-01 | 78.3% | 94.1% |
| 2e26A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 35.0 | 3.69e-01 | 84.5% | 74.6% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.51 | 29.0 | 3.39e-01 | 95.1% | 77.9% |
| 1tg7A04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 36.0 | 4.10e-01 | 84.1% | 96.5% |
| 4nhxA02 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 39.0 | 3.90e-01 | 80.1% | 77.4% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3344591 | 10.2.1.81 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP | 0.89 | 66.0 | 7.00e-01 | 80.1% | 83.9% |
| 3314257 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.88 | 65.0 | 7.38e-01 | 77.9% | 96.0% |
| 5040908 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.72 | 41.0 | 5.24e-01 | 75.2% | 96.2% |
| 5010847 | 10.2.1.72 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA | 0.71 | 40.0 | 5.29e-01 | 73.5% | 100.0% |
| 3703651 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 40.0 | 5.27e-01 | 71.2% | 99.2% |
| 152483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 49.0 | 4.53e-01 | 70.4% | 84.3% |
| 328688 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.69 | 52.0 | 5.47e-01 | 77.0% | 88.5% |
| 4048098 | 10.32.1.243 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29992 | 0.69 | 41.0 | 5.31e-01 | 92.0% | 100.0% |
| 4180781 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.68 | 42.0 | 5.24e-01 | 75.7% | 99.3% |
| 3693261 | 10.2.1.72 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA | 0.68 | 43.0 | 5.12e-01 | 84.1% | 92.3% |
| 1409656 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.67 | 51.0 | 5.22e-01 | 77.4% | 90.9% |
| 3620107 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.67 | 42.0 | 5.19e-01 | 73.0% | 100.0% |
| 1114663 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.66 | 56.0 | 4.89e-01 | 88.1% | 89.7% |
| 3698179 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 45.0 | 5.29e-01 | 77.0% | 99.4% |
| 3606027 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 41.0 | 5.05e-01 | 97.3% | 100.0% |
| 3451794 | 10.2.1.72 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › PNGaseA | 0.63 | 44.0 | 5.09e-01 | 83.6% | 98.1% |
| 1214 | 10.2.1.38 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N | 0.63 | 47.0 | 5.25e-01 | 77.4% | 97.2% |
| 5045890 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 40.0 | 4.98e-01 | 91.2% | 99.3% |
| 3933681 | 385.1.1.2 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › TGF_beta | 0.63 | 43.0 | 4.00e-01 | 77.0% | 55.4% |
| 3915206 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.62 | 43.0 | 4.89e-01 | 70.4% | 97.1% |
| 4942547 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 44.0 | 4.77e-01 | 71.2% | 89.5% |
| 4660646 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.62 | 46.0 | 4.51e-01 | 76.1% | 84.5% |
| 3909542 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.62 | 46.0 | 4.84e-01 | 77.4% | 89.5% |
| 296002 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.61 | 47.0 | 5.11e-01 | 80.1% | 95.8% |
| 4029586 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.60 | 40.0 | 4.79e-01 | 72.6% | 100.0% |
| 3774505 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.60 | 46.0 | 4.54e-01 | 78.3% | 83.4% |
| 5039141 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.59 | 39.0 | 4.74e-01 | 71.2% | 100.0% |
| 3172636 | 543.1.1.7 ↗ | few secondary structure elements › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Mid1 | 0.59 | 38.0 | 4.63e-01 | 71.7% | 98.6% |
| 3168473 | 10.32.1.306 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 | 0.59 | 41.0 | 4.49e-01 | 70.4% | 100.0% |
| 3333290 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.59 | 41.0 | 4.55e-01 | 70.4% | 100.0% |
| 3628597 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 38.0 | 4.47e-01 | 83.2% | 91.9% |
| 3390703 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 4.30e-01 | 70.8% | 88.2% |
| 5039229 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.57 | 42.0 | 4.60e-01 | 75.2% | 99.5% |
| 2389248 | 10.2.1.63 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MCP_V20_C | 0.54 | 40.0 | 4.04e-01 | 76.1% | 97.0% |
| 3923894 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.54 | 37.0 | 4.32e-01 | 70.4% | 97.5% |
| 3825032 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.54 | 38.0 | 3.57e-01 | 70.8% | 93.5% |
| 4947719 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 39.0 | 4.46e-01 | 82.7% | 99.4% |
| 5014960 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 40.0 | 4.44e-01 | 78.3% | 96.6% |
| 4025788 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.54 | 39.0 | 3.92e-01 | 75.2% | 71.5% |
| 2048183 | 10.1.1.50 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Dit-like_CBM2 | 0.53 | 37.0 | 3.76e-01 | 70.8% | 99.6% |
| 3547156 | 10.32.1.315 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C, Laminin_G_2 | 0.53 | 39.0 | 3.29e-01 | 74.8% | 74.8% |
| 1193 | 10.2.1.27 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Phage_G | 0.52 | 40.0 | 4.33e-01 | 78.3% | 94.1% |
| 3608442 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 36.0 | 3.78e-01 | 70.8% | 87.6% |
| 3439384 | 11.2.1.35 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › GRDP-like | 0.51 | 34.0 | 3.55e-01 | 81.4% | 72.2% |
| 3310681 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.51 | 40.0 | 4.23e-01 | 83.2% | 99.0% |
| 3241643 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.50 | 23.0 | 3.33e-01 | 75.2% | 95.0% |