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movement_protein
Euk-VirLettuce_chordovirus_1
movement_protein__YP_009552712__Lettuce_chordovirus_1__2200955
Identity
- Accession:
- YP_009552712 ↗
- Protein ID:
- movement_protein
- Kingdom:
- euk
Quality
62.7
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Tymovirales›
Betaflexiviridae›
Chordovirus›
Lettuce_chordovirus_1
TaxID: 2200955
Cluster
View cluster (19 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-272
Domain cluster:
rep: movement_protein__YP_009505633__Caucasus_prunus_virus__1667230__D7-263
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01107.24 best | MP | 94.6 | 8.20e-27 | 71.0% | 79.6% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.70 | 46.0 | 5.02e-01 | 91.2% | 77.9% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 50.0 | 4.51e-01 | 74.6% | 89.1% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 50.0 | 4.50e-01 | 74.6% | 88.0% |
| 2id4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 41.0 | 5.16e-01 | 92.1% | 100.0% |
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 50.0 | 4.37e-01 | 79.4% | 62.3% |
| 1tg7A05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 36.0 | 4.12e-01 | 82.9% | 72.7% |
| 3j4uH00 | 2.60.120.1110 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 36.0 | 4.52e-01 | 70.2% | 90.7% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 51.0 | 4.88e-01 | 84.6% | 82.7% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 45.0 | 4.64e-01 | 90.4% | 78.4% |
| 4i0wD02 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 33.0 | 4.30e-01 | 86.4% | 97.7% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 38.0 | 4.51e-01 | 93.9% | 97.4% |
| 2woyA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 38.0 | 4.48e-01 | 94.3% | 98.1% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 46.0 | 4.51e-01 | 86.4% | 92.7% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 38.0 | 4.46e-01 | 93.9% | 100.0% |
| 2bpa200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 39.0 | 4.35e-01 | 91.7% | 92.6% |
| 3gbwA00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.54 | 37.0 | 4.30e-01 | 87.7% | 96.3% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 33.0 | 3.68e-01 | 97.8% | 74.3% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 49.0 | 4.52e-01 | 96.9% | 89.5% |
| 1m06G00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 39.0 | 4.30e-01 | 91.7% | 93.0% |
| 8begA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 36.0 | 4.20e-01 | 93.9% | 98.1% |
| 1umzA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 3.87e-01 | 79.8% | 94.4% |
| 1pgsA02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 37.0 | 4.22e-01 | 91.7% | 97.1% |
| 2uwaA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 39.0 | 3.73e-01 | 80.3% | 90.9% |
| 6e20A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 28.0 | 3.61e-01 | 86.8% | 92.4% |
| 4qt6A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.50 | 32.0 | 3.78e-01 | 86.0% | 89.9% |
| 2okxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 40.0 | 4.33e-01 | 96.1% | 97.9% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3376950 | 11.1.4.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › MP | 0.83 | 43.0 | 6.08e-01 | 80.3% | 100.0% |
| 4326586 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.73 | 38.0 | 5.25e-01 | 86.0% | 97.5% |
| 2117349 | 10.2.1.10 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cucumo_coat | 0.68 | 45.0 | 4.85e-01 | 91.2% | 77.5% |
| 1114663 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.68 | 50.0 | 4.40e-01 | 74.6% | 82.4% |
| 3561036 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.67 | 44.0 | 4.74e-01 | 93.0% | 75.4% |
| 3591997 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 36.0 | 4.60e-01 | 89.5% | 90.0% |
| 3282993 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.66 | 43.0 | 5.22e-01 | 86.4% | 99.3% |
| 3612751 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 40.0 | 5.08e-01 | 85.1% | 100.0% |
| 3289166 | 10.20.1.2 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N | 0.64 | 34.0 | 4.73e-01 | 90.8% | 100.0% |
| 5055413 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.63 | 36.0 | 4.72e-01 | 92.1% | 98.5% |
| 4939115 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.62 | 39.0 | 4.79e-01 | 93.4% | 99.3% |
| 4814721 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.61 | 46.0 | 4.93e-01 | 96.1% | 88.6% |
| 1687952 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.61 | 45.0 | 4.64e-01 | 90.4% | 78.4% |
| 2044957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.60 | 50.0 | 4.87e-01 | 86.4% | 80.4% |
| 5029142 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 32.0 | 4.31e-01 | 91.7% | 100.0% |
| 1283663 | 11.1.5.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Antigen_C | 0.57 | 38.0 | 4.54e-01 | 95.2% | 98.1% |
| 1886797 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.57 | 47.0 | 4.53e-01 | 93.4% | 76.3% |
| 4097420 | 11.1.5.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Antigen_C | 0.57 | 38.0 | 4.47e-01 | 94.3% | 96.9% |
| 4270390 | 11.1.5.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Antigen_C | 0.56 | 38.0 | 4.38e-01 | 94.3% | 92.4% |
| 4959663 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.55 | 31.0 | 4.13e-01 | 89.0% | 100.0% |
| 3239601 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.55 | 31.0 | 4.07e-01 | 70.6% | 100.0% |
| 1193 | 10.2.1.27 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Phage_G | 0.53 | 39.0 | 4.30e-01 | 91.7% | 93.0% |
| 3328172 | 10.1.1.12 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C | 0.52 | 40.0 | 3.81e-01 | 79.8% | 90.0% |
| 3352288 | 10.1.1.12 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C | 0.52 | 40.0 | 3.73e-01 | 80.3% | 86.8% |
| 3977204 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 32.0 | 3.77e-01 | 86.4% | 86.9% |
| 2439648 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.51 | 46.0 | 4.37e-01 | 96.1% | 87.2% |
| 5029875 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 39.0 | 4.24e-01 | 95.6% | 95.7% |
| 2579092 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.51 | 47.0 | 4.44e-01 | 97.4% | 85.4% |
| 3810972 | 10.1.1.12 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C | 0.50 | 39.0 | 3.84e-01 | 79.4% | 93.9% |