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movement_protein
Euk-VirFragaria_chiloensis_latent_virus
movement_protein__YP_164804__Fragaria_chiloensis_latent_virus__255238
Identity
- Accession:
- YP_164804 ↗
- Protein ID:
- movement_protein
- Kingdom:
- euk
Quality
59.7
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Bromoviridae›
Ilarvirus›
Fragaria_chiloensis_latent_virus
TaxID: 255238
Cluster
View cluster (79 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-230
Domain cluster:
rep: movement_protein__YP_009551569__Tea_plant_line_pattern_virus__2419940__D19-222
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01573.22 best | Bromo_MP | 65.7 | 6.00e-18 | 87.1% | 48.3% |
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 50.0 | 5.27e-01 | 70.6% | 97.8% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 50.0 | 5.41e-01 | 71.1% | 97.6% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 52.0 | 5.21e-01 | 76.1% | 88.0% |
| 5c8cB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 49.0 | 4.33e-01 | 71.1% | 80.4% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 49.0 | 4.53e-01 | 71.6% | 94.1% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 48.0 | 4.70e-01 | 70.1% | 73.3% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 49.0 | 4.75e-01 | 71.1% | 89.0% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 48.0 | 4.46e-01 | 70.1% | 67.2% |
| 1c8nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 51.0 | 4.97e-01 | 76.1% | 90.0% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 51.0 | 4.95e-01 | 76.1% | 91.4% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 51.0 | 4.97e-01 | 76.1% | 89.4% |
| 1pgw200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 53.0 | 4.33e-01 | 79.6% | 92.3% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 48.0 | 4.39e-01 | 71.6% | 88.8% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 47.0 | 4.50e-01 | 70.1% | 71.4% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 47.0 | 4.78e-01 | 70.1% | 83.4% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 46.0 | 4.46e-01 | 70.1% | 77.7% |
| 1a6cA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 51.0 | 4.19e-01 | 80.1% | 93.4% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 45.0 | 4.25e-01 | 70.1% | 76.9% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 43.0 | 4.73e-01 | 99.5% | 81.7% |
| 3uesA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 36.0 | 4.44e-01 | 96.5% | 87.7% |
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 50.0 | 4.15e-01 | 80.1% | 96.2% |
| 2e26A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 41.0 | 4.64e-01 | 78.6% | 82.6% |
| 1pgsA01 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 42.0 | 5.07e-01 | 70.6% | 99.3% |
| 5l73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 43.0 | 4.59e-01 | 98.5% | 78.7% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 41.0 | 4.56e-01 | 97.5% | 82.7% |
| 2w1sA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 39.0 | 4.61e-01 | 76.6% | 92.1% |
| 2bpa200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 42.0 | 4.52e-01 | 70.1% | 89.1% |
| 2j1aA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 38.0 | 4.41e-01 | 76.1% | 88.7% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 4.29e-01 | 88.1% | 93.9% |
| 1uwwB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 41.0 | 4.38e-01 | 74.1% | 79.3% |
| 2jdaB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 40.0 | 4.66e-01 | 88.6% | 97.2% |
| 1jhjA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 41.0 | 4.52e-01 | 71.6% | 93.8% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 41.0 | 4.73e-01 | 88.6% | 100.0% |
| 1xruA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 35.0 | 3.92e-01 | 76.1% | 76.4% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.57 | 36.0 | 4.13e-01 | 85.1% | 87.9% |
| 2uwaA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 42.0 | 3.75e-01 | 76.6% | 86.9% |
| 4kq7A02 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.53 | 40.0 | 3.97e-01 | 78.1% | 84.8% |
| 2fd8A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.53 | 39.0 | 3.97e-01 | 76.1% | 90.5% |
| 4mzyA01 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.52 | 40.0 | 3.48e-01 | 79.6% | 92.5% |
| 1m06G00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 4.33e-01 | 89.1% | 92.5% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3314257 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.74 | 57.0 | 6.13e-01 | 79.6% | 99.4% |
| 3344591 | 10.2.1.81 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP | 0.73 | 58.0 | 5.77e-01 | 81.6% | 87.3% |
| 3620151 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 41.0 | 5.39e-01 | 86.1% | 100.0% |
| 143448 | 10.2.1.38 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N | 0.71 | 49.0 | 5.41e-01 | 70.6% | 100.0% |
| 328688 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.70 | 52.0 | 5.21e-01 | 76.1% | 88.0% |
| 4768609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 49.0 | 4.45e-01 | 71.1% | 93.0% |
| 3075118 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 49.0 | 4.51e-01 | 71.6% | 93.1% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.69 | 48.0 | 4.70e-01 | 70.1% | 73.3% |
| 1758310 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.69 | 51.0 | 5.17e-01 | 76.1% | 88.7% |
| 140027 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.69 | 48.0 | 4.46e-01 | 70.1% | 67.2% |
| 289259 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.69 | 51.0 | 4.93e-01 | 76.1% | 90.2% |
| 1409656 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.69 | 51.0 | 4.97e-01 | 76.1% | 90.0% |
| 5061835 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.68 | 43.0 | 4.88e-01 | 76.1% | 82.6% |
| 4567712 | 10.32.1.48 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_26 | 0.68 | 41.0 | 5.10e-01 | 91.0% | 96.8% |
| 1949032 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.67 | 47.0 | 4.50e-01 | 70.1% | 71.4% |
| 3805836 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 41.0 | 4.90e-01 | 71.6% | 94.8% |
| 4374005 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 32.0 | 4.11e-01 | 74.1% | 82.6% |
| 5056603 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 41.0 | 4.81e-01 | 75.1% | 92.9% |
| 1176686 | 10.32.1.77 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Reelin_subrepeat-B | 0.63 | 40.0 | 4.55e-01 | 75.6% | 84.5% |
| 5041422 | 10.1.2.184 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C | 0.62 | 43.0 | 4.47e-01 | 70.6% | 98.4% |
| 3894462 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.62 | 41.0 | 4.54e-01 | 76.6% | 83.1% |
| 5039884 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.61 | 42.0 | 4.55e-01 | 76.6% | 82.1% |
| 4207961 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.61 | 40.0 | 4.67e-01 | 78.6% | 91.7% |
| 1114663 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.60 | 52.0 | 4.38e-01 | 91.5% | 91.2% |
| 4049462 | 10.32.1.13 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_17_28 | 0.59 | 42.0 | 4.36e-01 | 96.5% | 77.4% |
| 2426588 | 10.32.1.262 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Golvesin_C | 0.57 | 39.0 | 4.65e-01 | 89.1% | 99.3% |
| 3938488 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.57 | 43.0 | 4.39e-01 | 78.1% | 81.0% |
| 3994036 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 43.0 | 3.89e-01 | 79.1% | 93.8% |
| 2388550 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.56 | 40.0 | 4.55e-01 | 79.1% | 96.1% |
| 3609926 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.56 | 34.0 | 4.06e-01 | 70.1% | 90.8% |
| 4947719 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 42.0 | 4.58e-01 | 90.0% | 97.0% |
| 3280361 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.54 | 39.0 | 3.70e-01 | 74.1% | 94.6% |
| 5037546 | 12.3.1.18 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydr_116N | 0.53 | 38.0 | 3.10e-01 | 72.1% | 77.0% |
| 3453048 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.52 | 39.0 | 3.89e-01 | 77.1% | 90.2% |
| 3586331 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.51 | 39.0 | 3.66e-01 | 78.6% | 64.4% |