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mu-1_protein

Euk-Vir

Mammalian_orthoreovirus_3

mu-1_protein__YP_003199421__Mammalian_orthoreovirus_3__538123

Identity

Accession:
YP_003199421 ↗
Protein ID:
mu-1_protein
Kingdom:
euk

Quality

63.2 mean pLDDT

Taxonomy

Orthornavirae› Duplornaviricota› Resentoviricetes› Reovirales› Spinareoviridae› Orthoreovirus› Mammalian_orthoreovirus_3

TaxID: 538123

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 46-184
PDB
D2 high residues 286-306_531-638
PDB
D3 high residues 309-497
PDB
Domain cluster: rep: VP5__YP_009351853__Fall_chinook_aquareovirus__1963254__D287-475
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05993.18 best Reovirus_M2 213.7 5.80e-63 100.0% 28.9%
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jmuB04 2.60.120.420 Mainly Beta › Sandwich › Jelly Rolls › Membrane penetration protein mu1, Chain B, domain 4 0.94 91.0 8.76e-01 98.9% 91.3%
3iylB03 2.60.120.420 Mainly Beta › Sandwich › Jelly Rolls › Membrane penetration protein mu1, Chain B, domain 4 0.87 80.0 7.44e-01 95.8% 79.2%
3rnsA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.68 30.0 3.88e-01 96.3% 70.4%
3rnsA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 30.0 3.96e-01 96.3% 78.0%
2q1zB02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 27.0 3.78e-01 95.2% 76.3%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 35.0 4.36e-01 88.4% 89.5%
1l9nA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 35.0 4.27e-01 88.4% 91.2%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 45.0 4.96e-01 97.4% 95.4%
1df0A03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.59 41.0 4.79e-01 95.2% 100.0%
3lwcA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 28.0 3.61e-01 96.3% 77.7%
8alzB04 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.59 33.0 4.18e-01 88.9% 91.8%
2x41A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 33.0 4.07e-01 88.9% 86.6%
2vvdA00 2.60.120.720 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 4.93e-01 95.8% 96.3%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 4.95e-01 95.2% 92.0%
5m59A06 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.57 32.0 3.95e-01 88.4% 89.3%
1jhjA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 42.0 4.49e-01 95.8% 88.2%
6mnjA01 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 43.0 4.64e-01 87.3% 94.2%
2wnoA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.57 34.0 4.20e-01 96.8% 96.5%
2okxA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 41.0 4.31e-01 95.8% 82.4%
1xzwA01 2.60.40.380 Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal 0.55 29.0 3.78e-01 93.1% 93.9%
1djxA03 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 37.0 4.40e-01 100.0% 98.5%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 27.0 3.62e-01 87.8% 89.5%
4b60A02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 39.0 4.25e-01 90.5% 89.1%
2bbaA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 47.0 4.78e-01 97.4% 95.7%
2ep6A01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 34.0 4.14e-01 99.5% 98.4%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.51e-01 99.5% 98.3%
4wqmA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 30.0 3.81e-01 96.3% 100.0%
3tcaA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 27.0 3.62e-01 84.7% 97.8%
4lhsA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 38.0 4.25e-01 95.8% 94.6%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 47.0 4.43e-01 97.9% 97.8%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 38.0 4.12e-01 95.8% 88.9%
6qdiA02 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.52 35.0 4.06e-01 94.2% 95.6%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 4.36e-01 98.4% 89.9%
6kxkB02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 35.0 4.01e-01 100.0% 97.0%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2794422 10.16.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in membrane penetration protein mu1 › Jelly-roll domain in membrane penetration protein mu1 › Reovirus_M2 0.94 90.0 8.43e-01 98.4% 84.8%
1124176 10.16.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in membrane penetration protein mu1 › Jelly-roll domain in membrane penetration protein mu1 › Reovirus_M2 0.87 80.0 8.15e-01 95.8% 97.3%
3272798 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.61 42.0 4.85e-01 95.8% 97.8%
3881289 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.59 44.0 4.79e-01 97.9% 91.8%
3407663 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 43.0 4.89e-01 95.8% 98.6%
1137922 11.1.1.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M,A2M_BRD 0.58 30.0 3.91e-01 86.8% 89.2%
1852013 11.1.5.40 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › BNR_assoc_N 0.57 44.0 4.61e-01 97.4% 88.7%
3741738 10.2.1.55 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.57 37.0 4.41e-01 98.4% 98.4%
4362871 10.2.1.86 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › But2 0.56 45.0 4.84e-01 94.7% 99.4%
3703952 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 32.0 3.94e-01 94.7% 91.8%
3246669 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.56 38.0 4.30e-01 94.7% 92.1%
5039918 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 37.0 4.19e-01 95.2% 90.0%
3213588 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.56 36.0 4.23e-01 94.7% 91.9%
3500088 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 4.35e-01 92.1% 88.5%
3250775 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 37.0 4.38e-01 100.0% 100.0%
3249011 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 37.0 4.29e-01 98.9% 92.9%
3273223 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.55 37.0 4.24e-01 93.1% 92.8%
3267026 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 34.0 4.17e-01 88.9% 97.5%
3168473 10.32.1.306 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 0.54 48.0 4.86e-01 97.4% 95.8%
4054976 10.2.1.75 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CBM96 0.54 44.0 4.73e-01 93.7% 99.4%
3659663 10.32.1.37 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin 0.54 42.0 4.45e-01 97.9% 90.6%
3762739 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.54 32.0 3.91e-01 97.4% 91.7%
3718771 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.54 35.0 3.91e-01 99.5% 82.7%
3609230 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 39.0 4.35e-01 100.0% 96.6%
3351346 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 41.0 4.45e-01 98.9% 96.8%
3357481 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 48.0 3.44e-01 99.5% 41.2%
3407300 10.32.1.5 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ephrin_lbd 0.52 45.0 4.64e-01 95.8% 97.8%
4019267 10.1.1.36 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Polysacc_lyase 0.52 48.0 4.43e-01 100.0% 96.2%
3901027 11.2.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_CAPS 0.52 34.0 4.01e-01 100.0% 95.4%
4017488 11.1.1.498 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LDB19 0.52 38.0 4.13e-01 95.2% 91.0%
3621449 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.52 35.0 4.03e-01 99.5% 93.6%
3639340 11.1.1.498 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LDB19 0.52 38.0 4.07e-01 94.7% 88.1%
3615742 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 36.0 4.07e-01 98.9% 92.4%
3680135 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.51 46.0 4.13e-01 98.9% 97.0%
1158353 10.32.1.30 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NPCBM 0.51 42.0 4.35e-01 96.3% 92.3%
3595385 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 39.0 4.20e-01 89.9% 94.4%
3597124 10.15.1.1 ↗ beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 0.50 33.0 3.86e-01 97.4% 94.6%
3881235 11.1.1.206 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL17R_fnIII_D1 0.50 34.0 3.59e-01 73.0% 75.3%
3741869 11.1.1.498 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LDB19 0.50 38.0 4.11e-01 94.7% 91.9%
3257602 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.50 35.0 4.03e-01 97.9% 97.8%
3553055 10.32.1.196 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › WLS_GOLD 0.50 44.0 4.52e-01 95.8% 100.0%
D4 medium residues 185-269
PDB