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myristylated_membrane
Euk-VirShrimp_hemocyte_iridescent_virus
myristylated_membrane__YP_010084921__Shrimp_hemocyte_iridescent_virus__2039780
Identity
- Accession:
- YP_010084921 ↗
- Protein ID:
- myristylated_membrane
- Kingdom:
- euk
Quality
71.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Decapodiridovirus›
Shrimp_hemocyte_iridescent_virus
TaxID: 2039780
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-68
Domain cluster:
rep: 157L__YP_009552438__Cherax_quadricarinatus_iridovirus__2035708__D2-64
D2
medium
residues 69-188
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4by6D02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 48.0 | 3.94e-01 | 94.2% | 74.2% |
| 6igxD01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 45.0 | 3.59e-01 | 95.0% | 41.6% |
| 4c1sA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.55 | 49.0 | 3.46e-01 | 98.3% | 62.9% |
| 3e4bA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 46.0 | 3.23e-01 | 92.5% | 35.4% |
| 7unkA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 48.0 | 3.12e-01 | 100.0% | 30.3% |
| 4gmnA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 48.0 | 3.16e-01 | 100.0% | 50.8% |
| 4ijaA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 42.0 | 3.95e-01 | 94.2% | 72.0% |
| 4c0eA02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 43.0 | 3.61e-01 | 96.7% | 83.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3545784 | 109.4.1.2088 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dopey_N, TPR_DOP1_M, PF26706 | 0.60 | 51.0 | 3.33e-01 | 95.8% | 43.2% |
| 3749753 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 48.0 | 3.21e-01 | 87.5% | 24.6% |
| 2327000 | 5088.1.1.0 ↗ | 0.59 | 46.0 | 2.84e-01 | 84.2% | 20.1% | |
| 3270451 | 109.4.1.388 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dopey_N | 0.58 | 52.0 | 4.07e-01 | 100.0% | 74.2% |
| 3782319 | 109.4.1.180 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_HEAT,Nipped-B_C | 0.57 | 51.0 | 3.00e-01 | 100.0% | 21.6% |
| 3679612 | 109.4.1.1638 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N, XMAP215_CLASP_TOG | 0.57 | 51.0 | 3.13e-01 | 100.0% | 22.8% |
| 3658051 | 109.4.1.257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 | 0.55 | 49.0 | 3.57e-01 | 100.0% | 47.3% |
| 3930303 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 46.0 | 3.30e-01 | 94.2% | 50.5% |
| 3335952 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.54 | 47.0 | 3.00e-01 | 94.2% | 24.7% |
| 3813020 | 109.4.1.546 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ecm29 | 0.54 | 45.0 | 3.38e-01 | 92.5% | 67.7% |
| 4001427 | 109.4.1.1950 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30196 | 0.54 | 48.0 | 3.55e-01 | 100.0% | 54.3% |
| 3467430 | 109.4.1.843 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EFR3_ARM | 0.54 | 46.0 | 3.15e-01 | 95.0% | 63.8% |
| 3841648 | 109.4.1.1758 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dopey_N, TPR_DOP1_M | 0.53 | 47.0 | 3.04e-01 | 100.0% | 29.9% |
| 3916429 | 109.4.1.2897 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EF3_GNC1, HEAT_EF3_N, TPR_DNAAF5, PF26715 | 0.53 | 47.0 | 2.79e-01 | 100.0% | 19.0% |
| 3748523 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.52 | 45.0 | 3.46e-01 | 94.2% | 42.2% |
| 3183215 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 39.0 | 3.14e-01 | 83.3% | 93.3% |
| 3817784 | 109.4.1.553 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Xpo1 | 0.50 | 44.0 | 3.26e-01 | 99.2% | 58.2% |
D3
medium
residues 209-268