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myristylated_membrane_protein_A
Euk-VirLymphocystis_disease_virus_4
myristylated_membrane_protein_A__YP_010087975__Lymphocystis_disease_virus_4__2704413
Identity
- Accession:
- YP_010087975 ↗
- Protein ID:
- myristylated_membrane_protein_A
- Kingdom:
- euk
Quality
53.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Lymphocystivirus›
Lymphocystis_disease_virus_4
TaxID: 2704413
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 229-301
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x2zD01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.66 | 59.0 | 4.64e-01 | 100.0% | 76.8% |
| 5eokA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.66 | 57.0 | 5.35e-01 | 100.0% | 79.8% |
| 1lk5A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 45.0 | 4.39e-01 | 72.6% | 69.6% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 43.0 | 3.85e-01 | 71.2% | 93.2% |
| 1av5A00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.63 | 47.0 | 4.12e-01 | 80.8% | 70.8% |
| 4wkrA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 45.0 | 4.55e-01 | 76.7% | 77.8% |
| 2cq4A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 45.0 | 4.08e-01 | 76.7% | 57.7% |
| 5h02A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 46.0 | 3.46e-01 | 79.5% | 89.9% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 43.0 | 4.10e-01 | 72.6% | 65.9% |
| 1wi8A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 41.0 | 4.08e-01 | 72.6% | 65.4% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.61 | 39.0 | 3.95e-01 | 74.0% | 66.2% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 42.0 | 3.80e-01 | 74.0% | 62.1% |
| 1xppD00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.60 | 41.0 | 3.69e-01 | 71.2% | 52.5% |
| 3drxB03 | 3.30.70.2000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 38.0 | 4.24e-01 | 72.6% | 92.2% |
| 5d4nC00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 42.0 | 3.83e-01 | 75.3% | 95.9% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 42.0 | 3.77e-01 | 74.0% | 90.9% |
| 2cz4A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 41.0 | 3.76e-01 | 74.0% | 90.9% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 3.43e-01 | 76.7% | 40.3% |
| 6qdwt00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 41.0 | 3.84e-01 | 75.3% | 75.3% |
| 2i62A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 42.0 | 2.94e-01 | 79.5% | 84.0% |
| 1a7gE00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 40.0 | 3.92e-01 | 74.0% | 65.9% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.57 | 39.0 | 3.66e-01 | 72.6% | 62.8% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.57 | 39.0 | 3.62e-01 | 72.6% | 60.4% |
| 4qu6A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 39.0 | 3.72e-01 | 74.0% | 61.1% |
| 3g88A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 42.0 | 2.97e-01 | 80.8% | 65.3% |
| 3jr1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 41.0 | 3.77e-01 | 83.6% | 89.9% |
| 1fbqA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 37.0 | 3.58e-01 | 74.0% | 72.7% |
| 8cwoF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.54 | 38.0 | 3.56e-01 | 74.0% | 67.8% |
| 5v7qT00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 39.0 | 3.57e-01 | 78.1% | 71.4% |
| 1p38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 40.0 | 3.36e-01 | 84.9% | 97.2% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.53 | 36.0 | 3.79e-01 | 72.6% | 92.4% |
| 6urtA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 37.0 | 3.53e-01 | 74.0% | 72.7% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.53 | 36.0 | 2.92e-01 | 72.6% | 82.2% |
| 2zw5A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 38.0 | 2.87e-01 | 78.1% | 32.8% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.51 | 36.0 | 3.80e-01 | 74.0% | 96.9% |
| 2bhgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 35.0 | 3.29e-01 | 71.2% | 62.0% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3437400 | 390.1.1.8 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_4 | 0.78 | 61.0 | 6.05e-01 | 100.0% | 80.0% |
| 3239559 | 390.1.1.7 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_3 | 0.74 | 58.0 | 4.92e-01 | 100.0% | 51.7% |
| 3878379 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.73 | 64.0 | 5.98e-01 | 100.0% | 77.8% |
| 3247529 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.71 | 49.0 | 5.15e-01 | 74.0% | 80.0% |
| 3485836 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.71 | 57.0 | 5.58e-01 | 100.0% | 81.2% |
| 3801762 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.70 | 51.0 | 5.55e-01 | 90.4% | 95.0% |
| 3488406 | 304.30.1.1 ↗ | a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A | 0.67 | 48.0 | 4.67e-01 | 75.3% | 70.0% |
| 3398289 | 390.1.1.8 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_4 | 0.67 | 61.0 | 5.55e-01 | 100.0% | 76.8% |
| 3660858 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.63 | 57.0 | 5.20e-01 | 100.0% | 81.1% |
| 1314824 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.63 | 44.0 | 3.85e-01 | 74.0% | 57.0% |
| 3728121 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 46.0 | 3.81e-01 | 80.8% | 44.3% |
| 3814236 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.62 | 46.0 | 3.23e-01 | 79.5% | 67.1% |
| 332301 | 304.4.1.11 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › EthD | 0.61 | 46.0 | 4.00e-01 | 79.5% | 99.1% |
| 4063438 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.60 | 42.0 | 3.86e-01 | 72.6% | 63.4% |
| 5184 | 304.4.1.11 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › EthD | 0.60 | 42.0 | 3.80e-01 | 74.0% | 62.1% |
| 3560178 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 43.0 | 3.99e-01 | 78.1% | 97.9% |
| 4046402 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.59 | 41.0 | 3.68e-01 | 72.6% | 59.0% |
| 4498473 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.58 | 41.0 | 3.79e-01 | 74.0% | 63.2% |
| 3418283 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 41.0 | 3.76e-01 | 75.3% | 89.0% |
| 4275789 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.58 | 40.0 | 3.73e-01 | 72.6% | 62.4% |
| 4409250 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.58 | 40.0 | 3.58e-01 | 72.6% | 56.7% |
| 4547549 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.58 | 41.0 | 3.63e-01 | 74.0% | 57.7% |
| 2710317 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.58 | 40.0 | 3.52e-01 | 72.6% | 54.6% |
| 4057993 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.57 | 41.0 | 3.70e-01 | 75.3% | 70.0% |
| 4045582 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.57 | 40.0 | 3.70e-01 | 74.0% | 63.2% |
| 3387365 | 872.8.1.0 ↗ | a+b two layers › Dodecin subunit-like › Probable RNA-binding protein N-terminal domain › Probable RNA-binding protein N-terminal domain | 0.57 | 39.0 | 4.08e-01 | 72.6% | 80.0% |
| 3290811 | 304.4.1.11 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › EthD | 0.57 | 40.0 | 3.58e-01 | 72.6% | 60.2% |
| 4953055 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.57 | 39.0 | 3.95e-01 | 72.6% | 70.7% |
| 3457894 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.57 | 39.0 | 3.32e-01 | 71.2% | 57.5% |
| 4636724 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.56 | 39.0 | 3.62e-01 | 72.6% | 60.6% |
| None | — | 0.56 | 42.0 | 2.98e-01 | 79.5% | 74.1% | |
| 4243267 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 43.0 | 3.01e-01 | 83.6% | 40.8% |
| 4278809 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.56 | 39.0 | 3.47e-01 | 72.6% | 56.2% |
| 4422649 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.56 | 39.0 | 3.66e-01 | 74.0% | 63.8% |
| 4477461 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.56 | 39.0 | 3.62e-01 | 74.0% | 63.2% |
| 4391298 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.56 | 39.0 | 3.59e-01 | 72.6% | 62.8% |
| 4599317 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.55 | 40.0 | 3.74e-01 | 76.7% | 74.2% |
| 4269000 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.55 | 38.0 | 3.42e-01 | 72.6% | 56.2% |
| 4307206 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.55 | 38.0 | 3.56e-01 | 72.6% | 63.4% |
| 3483319 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 40.0 | 3.62e-01 | 78.1% | 56.2% |
| 4562806 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.55 | 39.0 | 3.59e-01 | 74.0% | 63.8% |
| 4182477 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.55 | 39.0 | 3.55e-01 | 75.3% | 77.0% |
| 4274346 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.55 | 38.0 | 3.48e-01 | 72.6% | 60.2% |
| 4584493 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.55 | 39.0 | 3.57e-01 | 74.0% | 63.2% |
| 3839422 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.55 | 39.0 | 3.63e-01 | 75.3% | 74.2% |
| 3592303 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 40.0 | 2.86e-01 | 80.8% | 80.4% |
| 4512289 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.55 | 38.0 | 3.44e-01 | 74.0% | 57.1% |
| 3994611 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 39.0 | 3.09e-01 | 75.3% | 36.1% |
| 3778612 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.55 | 37.0 | 3.43e-01 | 72.6% | 59.0% |
| 3965111 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.54 | 38.0 | 3.53e-01 | 74.0% | 63.2% |
| 4503003 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.54 | 38.0 | 3.45e-01 | 74.0% | 58.0% |
| 4963916 | 325.1.3.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Pyrimidine nucleoside phosphorylase C-terminal domain › PYNP_C | 0.54 | 37.0 | 3.47e-01 | 72.6% | 66.3% |
| 4218922 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.54 | 37.0 | 3.37e-01 | 72.6% | 56.7% |
| 3927211 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 41.0 | 2.81e-01 | 87.7% | 33.6% |
| 3786296 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 41.0 | 3.57e-01 | 83.6% | 86.7% |
| None | — | 0.54 | 38.0 | 2.98e-01 | 75.3% | 82.4% | |
| 3875700 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 37.0 | 3.60e-01 | 72.6% | 75.0% |
| 4194372 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.53 | 38.0 | 3.15e-01 | 75.3% | 51.1% |
| 4668692 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.53 | 37.0 | 3.45e-01 | 74.0% | 62.8% |
| 330634 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.53 | 36.0 | 3.42e-01 | 72.6% | 57.1% |
| 3619535 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.53 | 37.0 | 3.24e-01 | 74.0% | 67.3% |
| 3570963 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.53 | 36.0 | 3.19e-01 | 72.6% | 47.3% |
| 3781323 | 304.9.1.6 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 | 0.52 | 38.0 | 3.49e-01 | 80.8% | 99.0% |
| 4991161 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.52 | 36.0 | 3.27e-01 | 74.0% | 95.2% |
| 4661047 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.51 | 38.0 | 2.68e-01 | 84.9% | 85.4% |
| 4188078 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.50 | 36.0 | 3.20e-01 | 78.1% | 59.1% |
| 4014343 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.50 | 35.0 | 3.19e-01 | 75.3% | 66.7% |
D2
high
residues 313-404
Domain cluster:
rep: collagen_repeat_protein_with_BclB_C-terminal_domain__YP_007354075__Acanthamoeba_polyphaga_moumouvirus__1269028__D377-418_430-470
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ablA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.64 | 39.0 | 3.90e-01 | 77.2% | 58.8% |
| 2gsbA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.61 | 38.0 | 4.02e-01 | 92.4% | 70.2% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 36.0 | 4.32e-01 | 73.9% | 98.2% |
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.59 | 37.0 | 3.69e-01 | 93.5% | 59.0% |
| 1m61A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 35.0 | 3.41e-01 | 72.8% | 52.9% |
| 1itvA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.58 | 43.0 | 3.40e-01 | 79.3% | 90.3% |
| 4ihqA01 | 3.30.450.370 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 37.0 | 3.06e-01 | 77.2% | 37.1% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 44.0 | 3.04e-01 | 85.9% | 45.8% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 47.0 | 3.37e-01 | 93.5% | 50.7% |
| 2rbcA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 49.0 | 3.46e-01 | 98.9% | 39.2% |
| 2i2lA01 | 2.10.70.50 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.56 | 32.0 | 4.06e-01 | 76.1% | 100.0% |
| 1rpyB00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 37.0 | 3.79e-01 | 76.1% | 72.1% |
| 4j87A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 46.0 | 3.25e-01 | 93.5% | 55.1% |
| 2dx0A00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 40.0 | 3.72e-01 | 77.2% | 60.7% |
| 3i2nA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 45.0 | 3.17e-01 | 97.8% | 49.6% |
| 2pm6D01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 47.0 | 3.38e-01 | 100.0% | 40.0% |
| 1w0pA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 44.0 | 3.02e-01 | 95.7% | 65.3% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 3.20e-01 | 100.0% | 37.2% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 46.0 | 3.24e-01 | 100.0% | 34.6% |
| 1k8kC00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 3.11e-01 | 98.9% | 57.9% |
| 4azzA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.52 | 43.0 | 3.55e-01 | 90.2% | 64.2% |
| 2ci9B00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 39.0 | 3.84e-01 | 80.4% | 79.0% |
| 4bbwA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 45.0 | 3.08e-01 | 100.0% | 42.3% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.51 | 45.0 | 3.61e-01 | 100.0% | 87.8% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 39.0 | 3.75e-01 | 80.4% | 79.8% |
| 3ow8C00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 3.17e-01 | 100.0% | 34.7% |
| 1nrvA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 38.0 | 3.75e-01 | 80.4% | 78.0% |
| 1w4tA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.51 | 34.0 | 3.39e-01 | 94.6% | 64.6% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 3.00e-01 | 100.0% | 33.4% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 44.0 | 3.71e-01 | 100.0% | 96.9% |
| 1i3zA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 38.0 | 3.70e-01 | 80.4% | 80.6% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3168104 | 5.1.5.52 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › EMC1_C | 0.69 | 52.0 | 3.08e-01 | 79.3% | 24.6% |
| 3219631 | 5.1.11.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › ANAPC4_WD40, Beta-prop_WDR35_2nd, Beta-prop_WDR35_TULP_N | 0.61 | 47.0 | 2.82e-01 | 83.7% | 23.7% |
| 3883097 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 38.0 | 4.28e-01 | 79.3% | 84.3% |
| 5045692 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 45.0 | 3.10e-01 | 80.4% | 40.6% |
| 3945385 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.60 | 40.0 | 3.21e-01 | 94.6% | 35.0% |
| 3167247 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 46.0 | 3.11e-01 | 84.8% | 47.2% |
| 3935617 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 46.0 | 3.15e-01 | 84.8% | 51.5% |
| 3368126 | 5.1.5.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 | 0.58 | 52.0 | 3.79e-01 | 100.0% | 57.5% |
| 3786890 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.57 | 43.0 | 3.45e-01 | 80.4% | 73.2% |
| 3993185 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 44.0 | 3.08e-01 | 84.8% | 51.2% |
| 3792083 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 45.0 | 3.09e-01 | 85.9% | 52.1% |
| 3623943 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.57 | 34.0 | 3.79e-01 | 78.3% | 74.7% |
| 3523657 | 5.1.4.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EPTP | 0.56 | 48.0 | 3.18e-01 | 93.5% | 50.0% |
| 3789628 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.56 | 42.0 | 2.93e-01 | 82.6% | 47.9% |
| 3996653 | 5.1.4.377 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_TULP_N | 0.55 | 50.0 | 3.36e-01 | 100.0% | 34.7% |
| 3258369 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 26.0 | 3.42e-01 | 75.0% | 100.0% |
| 3329666 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.55 | 49.0 | 3.24e-01 | 100.0% | 36.9% |
| 3575357 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 45.0 | 3.10e-01 | 90.2% | 39.4% |
| 3933015 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 26.0 | 3.41e-01 | 71.7% | 83.7% |
| 3719189 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 45.0 | 3.44e-01 | 93.5% | 77.9% |
| 4032324 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.54 | 44.0 | 3.33e-01 | 93.5% | 65.8% |
| 3220069 | 5.1.4.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N | 0.54 | 48.0 | 3.22e-01 | 100.0% | 57.0% |
| 3823490 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.54 | 48.0 | 3.86e-01 | 100.0% | 84.3% |
| 3740129 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 45.0 | 2.82e-01 | 95.7% | 29.8% |
| 3502613 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 46.0 | 3.22e-01 | 98.9% | 47.6% |
| 3443580 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.54 | 48.0 | 3.79e-01 | 100.0% | 81.0% |
| 4646165 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.54 | 30.0 | 3.08e-01 | 78.3% | 55.6% |
| 4494810 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 34.0 | 3.57e-01 | 100.0% | 72.5% |
| 3585489 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.53 | 46.0 | 3.14e-01 | 100.0% | 43.9% |
| 5004981 | 3335.1.1.0 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B | 0.53 | 35.0 | 4.01e-01 | 77.2% | 96.9% |
| 4266074 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.53 | 34.0 | 3.96e-01 | 85.9% | 98.3% |
| 3714545 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 42.0 | 2.91e-01 | 90.2% | 68.1% |
| 3600502 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 46.0 | 3.22e-01 | 100.0% | 36.6% |
| 3918876 | 5.1.4.295 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_DCAF12 | 0.53 | 45.0 | 2.88e-01 | 96.7% | 31.3% |
| 5003298 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.53 | 41.0 | 2.52e-01 | 97.8% | 13.8% |
| 3624644 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 45.0 | 3.17e-01 | 98.9% | 48.9% |
| 4975855 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.52 | 45.0 | 3.19e-01 | 100.0% | 38.7% |
| 4322510 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.52 | 39.0 | 3.81e-01 | 80.4% | 79.0% |
| 4405848 | 5.1.3.154 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 | 0.52 | 45.0 | 3.06e-01 | 100.0% | 35.7% |
| 3697386 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.52 | 44.0 | 3.41e-01 | 93.5% | 72.2% |
| 3477494 | 5.1.5.135 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Sema | 0.51 | 44.0 | 2.89e-01 | 100.0% | 36.5% |
| 3515797 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.51 | 45.0 | 3.18e-01 | 100.0% | 33.9% |
| 4943121 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 45.0 | 2.93e-01 | 100.0% | 23.3% |
| 4022704 | 5.1.5.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 | 0.51 | 43.0 | 2.97e-01 | 98.9% | 45.6% |
| 3264341 | 5.1.4.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N | 0.51 | 45.0 | 3.10e-01 | 100.0% | 32.0% |
| 4177200 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.51 | 27.0 | 3.33e-01 | 76.1% | 85.5% |
| 3243384 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 44.0 | 3.09e-01 | 100.0% | 35.4% |
| 3632850 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.51 | 43.0 | 2.93e-01 | 98.9% | 77.7% |
| 3470987 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.50 | 38.0 | 3.50e-01 | 80.4% | 73.3% |
| 3967510 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.50 | 31.0 | 3.50e-01 | 80.4% | 81.4% |
| 4101502 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.50 | 27.0 | 3.37e-01 | 77.2% | 88.9% |