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non-structural_glycoprotein
Euk-VirKoolpinyah_virus
non-structural_glycoprotein__YP_009177197__Koolpinyah_virus__1550518
Identity
- Accession:
- YP_009177197 ↗
- Protein ID:
- non-structural_glycoprotein
- Kingdom:
- euk
Quality
65.0
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Ephemerovirus›
Koolpinyah_virus
TaxID: 1550518
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-48_337-479
D2
high
residues 74-192
Domain cluster:
rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00974.25 best | Rhabdo_glycop_FD | 34.9 | 2.90e-08 | 77.3% | 86.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1503409 | 220.3.1.1 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop | 0.75 | 69.0 | 6.66e-01 | 96.6% | 97.0% |
| 2530507 | 220.3.1.3 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 | 0.68 | 62.0 | 5.01e-01 | 100.0% | 92.8% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.62 | 22.0 | 3.03e-01 | 91.6% | 60.3% |
| 185186 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.58 | 50.0 | 4.59e-01 | 96.6% | 99.4% |
| 2464208 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.56 | 50.0 | 4.59e-01 | 100.0% | 100.0% |
| 3508212 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.56 | 30.0 | 3.86e-01 | 75.6% | 90.0% |
| 2124201 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.54 | 47.0 | 4.30e-01 | 96.6% | 100.0% |
| 3231372 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.51 | 29.0 | 2.80e-01 | 87.4% | 51.5% |
| 5043357 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 26.0 | 2.83e-01 | 95.0% | 58.1% |
| 3846579 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.50 | 35.0 | 3.10e-01 | 70.6% | 50.6% |
| 3280008 | 3115.1.1.2 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4288 | 0.50 | 35.0 | 3.95e-01 | 76.5% | 93.3% |