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non-structural_polyprotein
Euk-VirGoose_astrovirus
non-structural_polyprotein__YP_009362293__Goose_astrovirus__1349999
Identity
- Accession:
- YP_009362293 ↗
- Protein ID:
- non-structural_polyprotein
- Kingdom:
- euk
Quality
62.6
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Stellavirales›
Astroviridae›
Avastrovirus›
Goose_astrovirus
TaxID: 1349999
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 374-513
D2
high
residues 559-723
Domain cluster:
rep: 100_kDa_protein__YP_008130303__Citrus_vein_enation_virus__1301220__D379-571
D3
high
residues 904-1011
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 23.0 | 3.01e-01 | 98.1% | 50.0% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 21.0 | 3.29e-01 | 99.1% | 91.9% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 32.0 | 3.37e-01 | 99.1% | 66.7% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 33.0 | 3.36e-01 | 85.2% | 66.1% |
| 2o5vA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 41.0 | 3.54e-01 | 90.7% | 97.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3873394 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.58 | 29.0 | 2.57e-01 | 73.1% | 32.9% |
| 3627778 | 220.1.1.64 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII | 0.55 | 33.0 | 3.48e-01 | 99.1% | 66.0% |
| 3175878 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 34.0 | 3.00e-01 | 85.2% | 46.5% |
| 3596312 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.50 | 33.0 | 3.13e-01 | 85.2% | 55.4% |
| 3270836 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.50 | 33.0 | 3.25e-01 | 85.2% | 62.6% |
D4
medium
residues 264-342
D5
medium
residues 1036-1093