non-structural_protein,_partial

Euk-Vir

Protoparvovirus_Zsana_2013_HUN

non-structural_protein,_partial__YP_009666130__Protoparvovirus_Zsana_2013_HUN__1755694

Identity

78.7 mean pLDDT

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Protoparvovirus› Protoparvovirus_Zsana/2013/HUN

TaxID: 1755694

View cluster (29 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-219

PDB

Domain cluster: rep: NS1__YP_009552695__Rhinolophus_pusillus_bocaparvovirus_1__2053079__D4-183

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12433.15 best	PV_NSP1	47.5	2.60e-12	32.1%	78.0%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1m55A00	3.40.1310.20	Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, ›	0.83	64.0	6.68e-01	97.6%	85.5%
6usmB01	3.40.1310.20	Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, ›	0.77	49.0	5.74e-01	86.6%	89.8%
4kw3A00	3.40.1310.20	Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, ›	0.70	64.0	5.90e-01	96.2%	88.0%
1pbuA00	3.30.70.1010	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation elongation factor EF1B, gamma chain, conserved domain	0.61	33.0	3.69e-01	74.2%	64.8%
3waiA02	2.60.40.3390	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.60	24.0	3.55e-01	71.8%	81.7%
2ql8A00	3.30.300.20	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain	0.56	35.0	4.26e-01	76.1%	94.3%
1lb6A00	2.60.210.10	Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	0.52	31.0	3.50e-01	77.5%	76.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1491756	304.55.1.9 ↗	a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › PV_NSP1	0.89	84.0	7.80e-01	97.6%	81.0%
4959045	304.8.1.81 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P	0.56	40.0	4.68e-01	80.4%	100.0%
4939098	11.14.1.1 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 › AglB_L1	0.56	24.0	3.44e-01	71.8%	83.8%
3242062	3680.1.1.1 ↗	a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › SARA_C	0.54	33.0	3.80e-01	87.1%	82.0%
3477854	3680.1.1.1 ↗	a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › SARA_C	0.53	30.0	3.71e-01	87.6%	90.4%
4315665	304.8.1.91 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF1424	0.52	42.0	4.27e-01	84.7%	96.7%

D2 high residues 329-512

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01057.24 best	Parvo_NS1	210.1	4.60e-62	97.3%	62.4%
PF00519.24	PPV_E1_C	42.9	5.00e-11	64.7%	37.4%
PF19263.6	DUF5906	37.0	6.90e-09	58.1%	92.0%

D3 medium residues 236-328

PDB

Domain cluster: rep: Rep_68_protein__YP_680422__adeno-associated_virus_2__10804__D219-282

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01057.24 best	Parvo_NS1	41.1	1.60e-10	97.9%	32.5%