non-structural_protein_1

Euk-Vir

Cherax_quadricarinatus_densovirus

non-structural_protein_1__YP_009134732__Cherax_quadricarinatus_densovirus__1642018

Identity

70.1 mean pLDDT

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Aquambidensovirus› Cherax_quadricarinatus_densovirus

TaxID: 1642018

View cluster (4 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 98-261

PDB

D2 medium residues 306-358_375-385

PDB

Domain cluster: rep: nonstructural_protein__YP_009507340__Sea_star-associated_densovirus__1979755__D301-358

D3 medium residues 386-431_551-575

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1e6dM01	1.20.85.10	Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like	0.59	44.0	3.45e-01	78.9%	45.5%
2ptfB02	1.20.58.290	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121.	0.58	37.0	4.05e-01	80.3%	80.7%
3iqtA01	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.57	48.0	4.08e-01	91.5%	99.1%
1wjoA01	1.10.418.10	Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain	0.54	31.0	2.79e-01	95.8%	39.4%
3cxbA03	1.10.1740.30	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain	0.53	35.0	3.42e-01	90.1%	60.5%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3608253	633.16.1.0 ↗	alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like	0.63	42.0	4.62e-01	98.6%	89.1%
3721924	4156.1.1.2 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C	0.62	42.0	3.01e-01	90.1%	23.8%
3494116	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.59	42.0	3.15e-01	78.9%	70.7%
4053116	152.1.2.1 ↗	alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6	0.58	39.0	3.81e-01	84.5%	62.5%
4063563	142.1.1.5 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI	0.53	38.0	3.44e-01	74.6%	67.4%
5070866	632.6.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit	0.52	35.0	3.54e-01	85.9%	70.0%

D4 medium residues 432-550

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	31.3	1.70e-07	100.0%	41.2%
PF01057.24	Parvo_NS1	53.8	2.10e-14	92.4%	38.0%
PF19263.6	DUF5906	27.9	4.60e-06	89.1%	90.3%