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non-structural_protein

Euk-Vir

Drosophila_A_virus

non-structural_protein__YP_003038595__Drosophila_A_virus__595895

Identity

Accession:: YP_003038595 ↗
Protein ID:: non-structural_protein
Kingdom:: euk

Quality

70.3 mean pLDDT

Taxonomy

Drosophila_A_virus

TaxID: 595895

Cluster

View cluster (20 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 748-821

PDB

D2 medium residues 1-30_93-129_206-309

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF22152.2 best	Permu_RdRp_palm	142.9	1.60e-41	66.1%	27.2%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2pggA01	3.90.1730.10	Alpha Beta › Alpha-Beta Complex › Infectious bursal virus vp1 polymerase fold › Infectious bursal virus vp1 polymerase domain	0.75	60.0	4.62e-01	82.5%	67.9%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1699894	304.48.2.2 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › 'palm' domain in birnaviruse RNA-dependent RNA polymerase › Permu_RdRp_palm	0.94	77.0	5.20e-01	84.2%	51.7%
3656168	304.48.1.1 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1	0.52	43.0	3.41e-01	87.7%	43.5%

D3 medium residues 31-92_130-152_589-615_654-665

PDB

Domain cluster: representative

D4 medium residues 153-205

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2czlA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.51	35.0	2.40e-01	71.7%	23.7%

D5 medium residues 310-388_449-543

PDB

Domain cluster: rep: RdRp__YP_009337318__Hubei_permutotetra-like_virus_6__1923080__D328-384_485-539

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF22152.2 best	Permu_RdRp_palm	73.6	1.90e-20	45.4%	22.7%
PF22152.2	Permu_RdRp_palm	61.5	9.30e-17	44.8%	19.9%

D6 medium residues 544-588_616-653

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF22260.2 best	Permu_RdRp_thumb	38.9	1.10e-09	53.0%	37.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1712471	4967.1.1.17 ↗	alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Permu_RdRp_thumb	0.90	84.0	6.84e-01	98.8%	80.1%

D7 medium residues 666-719

PDB

D8 medium residues 853-949

PDB