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non_structural_protein_P2

Euk-Vir

Sleeping_disease_virus

non_structural_protein_P2__NP_740654__Sleeping_disease_virus__78540

Identity

Accession:
NP_740654 ↗
Protein ID:
non_structural_protein_P2
Kingdom:
euk

Quality

76.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 182-307
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01443.25 best Viral_helicase1 54.6 1.90e-14 99.2% 51.3%
PF13604.13 AAA_30 33.7 4.40e-08 98.4% 58.1%
D2 high residues 342-438
PDB
CATH (84)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6jimB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.98 96.0 8.35e-01 100.0% 72.9%
4b3fX03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.86 81.0 6.21e-01 100.0% 68.8%
3vkwA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 80.0 6.81e-01 100.0% 68.9%
5eanA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 79.0 6.05e-01 100.0% 69.6%
2xzlA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 79.0 5.99e-01 100.0% 69.8%
3upuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 70.0 6.24e-01 86.6% 78.5%
5rl9B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 78.0 6.62e-01 100.0% 77.9%
6vsxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 77.0 6.42e-01 100.0% 82.4%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 76.0 6.29e-01 100.0% 80.1%
3u4qA04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 75.0 5.38e-01 100.0% 72.7%
1w36D03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 74.0 5.97e-01 96.9% 80.9%
3e1sA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 74.0 6.38e-01 97.9% 76.6%
3jb9X01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 69.0 5.19e-01 100.0% 64.2%
6b4kB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 67.0 5.51e-01 100.0% 84.1%
1hv8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 66.0 5.68e-01 100.0% 96.7%
4w7sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 65.0 5.25e-01 100.0% 78.0%
6x50A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 66.0 5.06e-01 100.0% 70.0%
1ej0A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 62.0 5.06e-01 95.9% 77.8%
3b85A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 64.0 5.18e-01 100.0% 73.8%
2b3tA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 59.0 4.74e-01 96.9% 80.7%
4dcmA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 59.0 4.87e-01 96.9% 76.4%
1rljA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.67 56.0 5.05e-01 91.8% 72.6%
2zpaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 59.0 5.34e-01 100.0% 84.6%
2xgjB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 4.64e-01 100.0% 94.4%
1m6eX02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 57.0 4.47e-01 96.9% 79.4%
4ag6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 59.0 4.43e-01 100.0% 60.7%
3lqkA00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.66 55.0 4.41e-01 91.8% 75.3%
3fbtA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 56.0 5.11e-01 95.9% 88.6%
5dzsB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 56.0 5.10e-01 95.9% 88.6%
1akqA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.65 53.0 4.65e-01 88.7% 76.9%
1nytA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 56.0 4.95e-01 95.9% 83.9%
2n3zA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 49.0 4.87e-01 78.4% 76.8%
1cr2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 57.0 4.34e-01 100.0% 74.1%
3fdbA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.65 56.0 4.35e-01 96.9% 58.5%
3wy7A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.64 56.0 4.31e-01 99.0% 55.3%
3eucA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.64 56.0 4.45e-01 99.0% 61.4%
2p35A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 55.0 4.64e-01 97.9% 71.8%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 56.0 4.39e-01 100.0% 79.1%
3ws7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 52.0 4.32e-01 89.7% 61.7%
3m6mD00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 52.0 4.88e-01 88.7% 79.7%
3pwzA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 53.0 4.93e-01 92.8% 93.4%
2uyyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 51.0 4.35e-01 90.7% 64.5%
2acfB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.63 55.0 4.62e-01 100.0% 93.6%
5je8B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 52.0 4.34e-01 89.7% 64.5%
3pp8A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 52.0 4.74e-01 88.7% 99.2%
3fdjA01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.62 46.0 4.43e-01 77.3% 69.7%
2hsjD00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.62 50.0 3.93e-01 88.7% 63.6%
2m6rA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.62 50.0 4.41e-01 89.7% 75.8%
2xvyA02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 48.0 4.50e-01 85.6% 87.1%
2ayxA01 3.40.50.10970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 43.0 4.12e-01 87.6% 63.2%
3bxpB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 49.0 3.64e-01 89.7% 69.1%
3wicA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 52.0 4.29e-01 96.9% 76.0%
1vkhA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 49.0 3.61e-01 88.7% 63.6%
3vvlA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 49.0 3.57e-01 88.7% 71.4%
1ozhB03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.59 51.0 4.11e-01 96.9% 69.9%
3f67A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 48.0 3.65e-01 89.7% 67.5%
1w4bA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 52.0 4.02e-01 100.0% 60.2%
3twoA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 50.0 4.34e-01 95.9% 85.0%
6iheA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 49.0 4.42e-01 96.9% 90.7%
2eklA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 47.0 4.41e-01 88.7% 71.1%
2qtlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.58 43.0 3.70e-01 78.4% 99.4%
1hyeA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 49.0 4.44e-01 100.0% 97.3%
1orvA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 46.0 3.44e-01 88.7% 73.6%
5ao9A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 46.0 3.36e-01 88.7% 70.4%
3kznA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.57 47.0 4.01e-01 91.8% 88.2%
4i62A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 43.0 4.37e-01 89.7% 84.9%
3uenA01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.56 44.0 4.59e-01 84.5% 97.8%
5bq5B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 4.03e-01 100.0% 66.8%
1sxjE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 4.24e-01 100.0% 73.7%
4e4tB01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 47.0 4.54e-01 93.8% 89.4%
3al2A02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.56 46.0 4.61e-01 90.7% 95.9%
1xfdA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 44.0 3.33e-01 88.7% 70.7%
3vpxB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 46.0 3.73e-01 96.9% 92.5%
1gkpA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.54 46.0 3.17e-01 95.9% 54.9%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 47.0 3.69e-01 100.0% 65.9%
6acsA00 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.53 42.0 3.27e-01 85.6% 85.3%
1ekeA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 38.0 3.26e-01 76.3% 83.0%
1f2dA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 36.0 3.60e-01 79.4% 66.7%
1c1dA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 46.0 3.68e-01 97.9% 91.1%
2y7iA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 40.0 4.05e-01 88.7% 84.0%
7essA01 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.52 39.0 3.59e-01 81.4% 67.4%
3mpkA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 40.0 4.04e-01 88.7% 84.2%
4ltyA02 3.30.160.720 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 33.0 3.85e-01 81.4% 100.0%
1kcxA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.52 43.0 2.98e-01 94.8% 45.8%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4331804 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 81.0 6.27e-01 100.0% 58.5%
3926025 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 81.0 6.55e-01 100.0% 75.9%
3520006 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 81.0 6.08e-01 100.0% 68.8%
3578404 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 76.0 5.73e-01 93.8% 60.9%
5005831 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 81.0 6.31e-01 100.0% 70.0%
3985691 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.86 81.0 6.61e-01 100.0% 84.8%
3891107 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 81.0 6.01e-01 100.0% 75.0%
3428412 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 81.0 6.00e-01 100.0% 69.5%
3913640 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 81.0 5.92e-01 100.0% 62.6%
4943170 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 80.0 6.22e-01 100.0% 67.2%
3275469 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.86 80.0 5.97e-01 100.0% 77.1%
3397089 2004.1.1.920 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, AAA_11, AAA_12 0.85 80.0 4.78e-01 100.0% 22.8%
3246401 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 80.0 6.06e-01 100.0% 67.6%
5024276 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 80.0 5.90e-01 100.0% 63.0%
3433486 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 80.0 5.96e-01 100.0% 64.5%
3210977 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 80.0 6.04e-01 100.0% 63.8%
3525324 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 80.0 5.92e-01 100.0% 63.6%
3189268 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 79.0 5.73e-01 100.0% 68.8%
5015395 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 80.0 6.25e-01 100.0% 68.6%
3605331 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 79.0 5.99e-01 100.0% 65.4%
3593770 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 79.0 5.98e-01 100.0% 65.1%
3696119 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 80.0 5.94e-01 100.0% 69.1%
3222867 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.85 79.0 5.97e-01 100.0% 70.7%
4029378 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 5.95e-01 100.0% 70.7%
4943903 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 78.0 4.54e-01 99.0% 22.1%
3838509 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 6.08e-01 100.0% 71.0%
1323360 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.84 79.0 7.27e-01 100.0% 83.6%
4964651 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 6.30e-01 100.0% 70.4%
3784726 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 5.82e-01 100.0% 61.7%
4028314 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 5.75e-01 100.0% 66.1%
3936669 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 6.02e-01 100.0% 69.3%
3435461 2004.1.1.195 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C 0.84 79.0 5.99e-01 100.0% 74.3%
3408803 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 6.11e-01 100.0% 73.8%
3199673 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 5.66e-01 100.0% 63.2%
3240292 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 78.0 5.96e-01 100.0% 67.6%
3389373 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 6.06e-01 100.0% 69.5%
3796494 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 5.67e-01 100.0% 57.6%
3415146 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 79.0 5.76e-01 100.0% 64.3%
3218209 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 78.0 5.38e-01 100.0% 56.7%
3535364 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 78.0 5.93e-01 100.0% 69.5%
3930896 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.84 78.0 6.06e-01 100.0% 71.3%
3786529 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.83 78.0 5.80e-01 100.0% 71.1%
3617007 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.83 78.0 5.83e-01 100.0% 64.1%
3603695 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.83 75.0 5.91e-01 95.9% 67.0%
2142440 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.83 77.0 5.91e-01 100.0% 70.2%
3475074 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.83 77.0 5.61e-01 100.0% 67.8%
2095415 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.83 78.0 6.43e-01 100.0% 72.5%
3972737 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.83 77.0 4.71e-01 100.0% 26.7%
3996625 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.83 76.0 6.59e-01 97.9% 84.3%
3688101 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.82 77.0 5.76e-01 100.0% 69.5%
3760903 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.82 70.0 5.58e-01 89.7% 73.7%
3943705 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.82 75.0 6.08e-01 96.9% 77.6%
3589167 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.82 70.0 6.07e-01 89.7% 75.0%
4064402 2004.1.1.363 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C 0.82 76.0 4.37e-01 100.0% 38.8%
3978023 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.82 75.0 6.05e-01 96.9% 77.6%
3185870 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.82 75.0 5.77e-01 100.0% 76.7%
4429341 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.81 74.0 5.90e-01 96.9% 73.3%
3731003 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 75.0 5.61e-01 100.0% 61.8%
3278699 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.80 73.0 6.13e-01 96.9% 61.3%
3733470 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.80 73.0 5.76e-01 97.9% 73.2%
3163822 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.80 73.0 6.11e-01 96.9% 77.4%
3305691 2004.1.1.298 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase 0.80 71.0 5.94e-01 93.8% 72.9%
3511279 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 72.0 5.60e-01 95.9% 69.7%
3432662 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.79 73.0 5.63e-01 100.0% 68.3%
3682367 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.79 68.0 6.00e-01 90.7% 77.0%
4251811 2004.1.1.508 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, UvrD_C_2 0.79 73.0 4.84e-01 100.0% 80.3%
3372829 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 70.0 6.01e-01 93.8% 77.9%
3362146 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.79 70.0 5.37e-01 93.8% 55.5%
None 0.79 72.0 6.20e-01 97.9% 80.7%
3926523 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 71.0 5.86e-01 96.9% 64.8%
3683589 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.79 70.0 4.52e-01 94.8% 32.4%
3439817 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.79 72.0 5.54e-01 100.0% 66.7%
3423525 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.78 73.0 5.54e-01 100.0% 73.3%
3676955 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.78 71.0 5.73e-01 96.9% 74.6%
3658525 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.78 68.0 5.90e-01 91.8% 75.7%
3807611 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 70.0 5.87e-01 96.9% 70.3%
3980676 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.77 70.0 5.27e-01 100.0% 61.3%
3289802 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.77 70.0 4.28e-01 97.9% 19.1%
3656784 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.77 70.0 5.56e-01 96.9% 70.6%
3286902 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.76 69.0 5.84e-01 96.9% 78.1%
3385675 2004.1.1.298 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase 0.75 67.0 5.75e-01 94.8% 64.1%
5023408 2004.1.1.89 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH 0.75 68.0 5.22e-01 100.0% 74.8%
3011802 2004.1.1.69 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Peptidase_C9 0.74 66.0 6.02e-01 100.0% 74.8%
3402307 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.72 66.0 5.20e-01 100.0% 94.4%
5081670 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.72 65.0 5.06e-01 100.0% 71.4%
3505183 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.71 65.0 4.86e-01 100.0% 83.5%
3956232 2004.1.1.89 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH 0.71 64.0 4.75e-01 100.0% 65.4%
3596401 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 58.0 5.18e-01 96.9% 63.7%
3789466 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 57.0 4.82e-01 96.9% 54.2%
3243146 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 62.0 4.79e-01 97.9% 75.3%
5015887 2006.1.3.5 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DUF2100 0.67 52.0 4.99e-01 84.5% 97.4%
3172002 2007.25.1.1 a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domain in Ribosomal protein L1 › Rossmann-like domain in Ribosomal protein L1 › Ribosomal_L1 0.60 45.0 4.61e-01 80.4% 86.3%
4979458 2004.1.1.98 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 0.60 53.0 4.55e-01 100.0% 68.1%
4977967 2003.1.1.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.59 52.0 4.08e-01 97.9% 58.1%
5076169 2003.1.14.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N 0.57 48.0 4.18e-01 94.8% 87.7%
3654445 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 47.0 3.58e-01 100.0% 83.1%
3736662 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 44.0 2.92e-01 88.7% 53.0%
D3 high residues 479-606
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01707.23 best Peptidase_C9 65.1 9.70e-18 96.9% 43.6%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3trkA01 3.90.70.110 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Alphavirus nsP2 protease domain 0.90 84.0 8.21e-01 100.0% 91.2%
2kebA00 1.10.8.530 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain 0.62 34.0 4.16e-01 100.0% 85.9%
3cedA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 28.0 3.19e-01 89.1% 65.3%
3x3bA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 43.0 3.44e-01 91.4% 95.6%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
224043 219.1.1.12 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C9 0.88 84.0 8.02e-01 100.0% 91.6%
3752690 386.1.1.66 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Spt46 0.53 24.0 3.37e-01 75.0% 94.4%
D4 high residues 650-811
PDB
D5 medium residues 1-120
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20896.3 best ToMV_Hel_N 85.1 8.30e-24 85.0% 62.0%