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nonstructural_NSs_protein
Euk-VirWatermelon_bud_necrosis_virus
nonstructural_NSs_protein__YP_009505542__Watermelon_bud_necrosis_virus__76052
Identity
- Accession:
- YP_009505542 ↗
- Protein ID:
- nonstructural_NSs_protein
- Kingdom:
- euk
Quality
78.6
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Elliovirales›
Tospoviridae›
Orthotospovirus›
Watermelon_bud_necrosis_virus
TaxID: 76052
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 338-436
Domain cluster:
rep: NSs__YP_001740043__Tomato_zonate_spot_virus__460926__D339-437
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23017.3 best | WIV_2 | 134.3 | 1.80e-39 | 86.9% | 96.5% |
D2
medium
residues 1-47_104-243
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03231.19 best | Tospov_NS-S_N | 181.7 | 3.10e-53 | 75.9% | 40.5% |
| PF03231.19 | Tospov_NS-S_N | 58.1 | 1.10e-15 | 25.7% | 14.2% |
D3
medium
residues 48-103_244-335
Domain cluster:
rep: nonstructural_protein__YP_010086065__Alstroemeria_necrotic_streak_virus__693450__D50-104_243-329
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03231.19 best | Tospov_NS-S_N | 124.1 | 1.00e-35 | 63.5% | 26.5% |
| PF03231.19 | Tospov_NS-S_N | 78.0 | 1.00e-21 | 38.5% | 16.0% |