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nonstructural_protein_NS1

Euk-Vir

Diatraea_saccharalis_densovirus

nonstructural_protein_NS1__NP_046813__Diatraea_saccharalis_densovirus__72003

Identity

Accession:: NP_046813 ↗
Protein ID:: nonstructural_protein_NS1
Kingdom:: euk

Quality

70.9 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Diatraea_saccharalis_densovirus

TaxID: 72003

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 59-217

PDB

Domain cluster: rep: nonstructural_protein__YP_009507340__Sea_star-associated_densovirus__1979755__D90-231

D2 high residues 269-334

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2w0gA00	1.20.58.610	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain	0.66	48.0	3.93e-01	92.4%	40.3%
1gpjA03	1.10.1200.70	Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glutamyl tRNA-reductase dimerization domain	0.64	47.0	4.37e-01	78.8%	71.8%
3h1qA02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.63	40.0	3.41e-01	71.2%	37.4%
2pbiA02	1.10.1240.60	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 ›	0.62	54.0	4.74e-01	100.0%	65.3%
1qusA01	1.10.8.350	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase	0.62	45.0	3.76e-01	77.3%	54.0%
2kmfA01	1.20.58.810	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27	0.61	43.0	3.76e-01	75.8%	98.0%
3ddeB00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.56	50.0	3.42e-01	100.0%	51.1%
4v1gA00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.54	36.0	3.35e-01	80.3%	54.1%
3ousA00	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.53	44.0	4.14e-01	95.5%	80.5%
8ctsB01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.52	43.0	3.99e-01	95.5%	77.0%
2jbwA01	1.20.1440.110	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase	0.52	37.0	3.27e-01	97.0%	47.6%
5cbgA00	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.51	41.0	3.62e-01	90.9%	65.7%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3791570	2007.2.3.1 ↗	a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase	0.65	51.0	3.33e-01	87.9%	18.8%

D3 high residues 353-541

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	32.7	6.40e-08	93.7%	49.5%
PF01057.24	Parvo_NS1	53.5	2.50e-14	77.8%	42.8%
PF19263.6	DUF5906	28.5	2.90e-06	56.1%	92.9%