nonstructural_protein_NS1

Euk-Vir

Danaus_plexippus_plexippus_iteravirus

nonstructural_protein_NS1__YP_009021036__Danaus_plexippus_plexippus_iteravirus__1469956

Identity

51.7 mean pLDDT

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Iteradensovirus› Danaus_plexippus_plexippus_iteravirus

TaxID: 1469956

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 221-259_311-363_382-399

PDB

D2 medium residues 480-556

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3l9fA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	42.0	4.06e-01	81.8%	93.3%
3qvsA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.52	43.0	3.01e-01	98.7%	93.8%
2o8bB03	1.10.1420.10	Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 ›	0.51	37.0	2.82e-01	77.9%	80.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3881266	108.1.1.99 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7	0.56	39.0	3.85e-01	74.0%	95.3%

D3 medium residues 557-611_723-752

PDB

Domain cluster: rep: non-structural_protein_1__YP_009134732__Cherax_quadricarinatus_densovirus__1642018__D386-431_551-575

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2dqlA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	36.0	3.28e-01	100.0%	48.7%
2rq1A00	1.20.80.10	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein ›	0.55	35.0	3.26e-01	95.3%	50.5%
4bouA00	3.90.70.80	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A ›	0.55	36.0	3.06e-01	81.2%	41.1%
1xn8A00	1.10.3230.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › YqbG-like	0.52	35.0	3.06e-01	78.8%	45.0%
4fymF00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.51	37.0	2.89e-01	78.8%	92.3%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3838710	7014.1.1.2 ↗	alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE	0.68	37.0	3.25e-01	96.5%	34.6%
3427551	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.54	44.0	4.07e-01	91.8%	90.9%
4190659	2500.1.1.2 ↗	a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC	0.52	41.0	2.43e-01	84.7%	45.4%
3597512	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.52	41.0	4.31e-01	96.5%	98.7%
3227144	3277.2.1.1 ↗	alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C	0.52	42.0	3.99e-01	91.8%	81.0%
3668664	632.1.1.12 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › GAUT_1	0.50	36.0	3.28e-01	75.3%	67.8%

D4 medium residues 612-722

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19263.6 best	DUF5906	29.4	1.60e-06	93.7%	91.1%
PF01057.24	Parvo_NS1	41.5	1.10e-10	89.2%	32.8%