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nonstructural_protein_NS1
Euk-VirSpanish_goat_encephalitis_virus
nonstructural_protein_NS1__YP_009163751__Spanish_goat_encephalitis_virus__1691889
Identity
- Accession:
- YP_009163751 ↗
- Protein ID:
- nonstructural_protein_NS1
- Kingdom:
- euk
Quality
86.8
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Orthoflavivirus›
Spanish_goat_encephalitis_virus
TaxID: 1691889
Cluster
View cluster (33 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-171
Domain cluster:
rep: non-structural_protein_NS1__NP_775517__Powassan_virus__11083__D32-172
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00948.27 best | Flavi_NS1 | 105.2 | 5.00e-30 | 100.0% | 41.1% |
D2
high
residues 181-277
Domain cluster:
rep: nonstructural_protein_NS1__YP_009227199__Zika_virus__64320__D175-279
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00948.27 best | Flavi_NS1 | 81.1 | 1.00e-22 | 100.0% | 25.8% |
D3
high
residues 285-347
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00948.27 best | Flavi_NS1 | 89.6 | 2.70e-25 | 100.0% | 16.1% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.52 | 36.0 | 3.14e-01 | 76.2% | 92.7% |
| 4n3pA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.51 | 37.0 | 2.70e-01 | 81.0% | 47.6% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.18e-01 | 79.4% | 77.1% |
| 2o30A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 35.0 | 3.28e-01 | 74.6% | 90.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4875075 | 3828.1.1.1 ↗ | a/b three-layered sandwiches › Flavivirus non-structural protein 1 (NS1) a/b domain › Flavivirus non-structural protein 1 (NS1) a/b domain › Flavivirus non-structural protein 1 (NS1) a/b domain › Flavi_NS1 | 0.95 | 91.0 | 6.32e-01 | 100.0% | 37.4% |
| 1282876 | 3829.1.1.1 ↗ | beta meanders › Flavivirus non-structural protein 1 (NS1) beta-meander domain › Flavivirus non-structural protein 1 (NS1) beta-meander domain › Flavivirus non-structural protein 1 (NS1) beta-meander domain › Flavi_NS1 | 0.94 | 90.0 | 6.13e-01 | 100.0% | 33.9% |
| 5049424 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 39.0 | 3.02e-01 | 74.6% | 61.4% |
| 4996749 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 40.0 | 2.79e-01 | 88.9% | 32.4% |
| 5058953 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 3.28e-01 | 90.5% | 57.9% |
| 3224627 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 34.0 | 2.54e-01 | 71.4% | 41.6% |
| 3949699 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.50 | 34.0 | 2.25e-01 | 71.4% | 46.0% |
| 4989442 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.50 | 42.0 | 3.15e-01 | 100.0% | 64.7% |