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nonstructural_protein_NS1
Euk-VirSaint_Louis_encephalitis_virus
nonstructural_protein_NS1__YP_009329950__Saint_Louis_encephalitis_virus__11080
Identity
- Accession:
- YP_009329950 ↗
- Protein ID:
- nonstructural_protein_NS1
- Kingdom:
- euk
Quality
83.8
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Orthoflavivirus›
St._Louis_encephalitis_virus
TaxID: 11080
Cluster
View cluster (33 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-171
Domain cluster:
rep: non-structural_protein_NS1__NP_775517__Powassan_virus__11083__D32-172
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00948.27 best | Flavi_NS1 | 156.7 | 1.10e-45 | 100.0% | 40.0% |
D2
medium
residues 177-262
Domain cluster:
rep: nonstructural_protein_NS1__YP_009227199__Zika_virus__64320__D175-279
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00948.27 best | Flavi_NS1 | 111.8 | 5.10e-32 | 100.0% | 23.9% |
D3
medium
residues 263-352
Domain cluster:
rep: nonstructural_protein_NS1__YP_009163751__Spanish_goat_encephalitis_virus__1691889__D285-347
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00948.27 best | Flavi_NS1 | 143.8 | 9.00e-42 | 100.0% | 25.0% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5v6fA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.50 | 37.0 | 3.31e-01 | 80.0% | 98.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1282876 | 3829.1.1.1 ↗ | beta meanders › Flavivirus non-structural protein 1 (NS1) beta-meander domain › Flavivirus non-structural protein 1 (NS1) beta-meander domain › Flavivirus non-structural protein 1 (NS1) beta-meander domain › Flavi_NS1 | 0.97 | 94.0 | 7.04e-01 | 100.0% | 47.6% |
| 4875075 | 3828.1.1.1 ↗ | a/b three-layered sandwiches › Flavivirus non-structural protein 1 (NS1) a/b domain › Flavivirus non-structural protein 1 (NS1) a/b domain › Flavivirus non-structural protein 1 (NS1) a/b domain › Flavi_NS1 | 0.95 | 91.0 | 7.09e-01 | 100.0% | 52.6% |
| 4351809 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.57 | 27.0 | 3.25e-01 | 80.0% | 66.7% |
| 5042797 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.51 | 31.0 | 3.60e-01 | 90.0% | 91.7% |
| 5068538 | 7072.1.1.0 ↗ | beta sandwiches › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain | 0.50 | 40.0 | 3.62e-01 | 91.1% | 95.6% |
| 4489497 | 76.1.1.5 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Beta-prism_lec | 0.50 | 37.0 | 3.32e-01 | 81.1% | 92.1% |