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nonstructural_protein_NS2A
Euk-VirIlomantsi_virus
nonstructural_protein_NS2A__YP_009268574__Ilomantsi_virus__1445557
Identity
- Accession:
- YP_009268574 ↗
- Protein ID:
- nonstructural_protein_NS2A
- Kingdom:
- euk
Quality
77.6
mean pLDDT
Taxonomy
TaxID: 1445557
Cluster
View cluster (21 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-85
Domain cluster:
rep: NS2A__YP_009553730__Kampung_Karu_virus__2045186__D1-67
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01005.25 best | Flavi_NS2A | 54.9 | 1.60e-14 | 87.1% | 36.7% |
D2
medium
residues 86-188
Domain cluster:
rep: NS2A__YP_009553730__Kampung_Karu_virus__2045186__D68-171
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.59 | 38.0 | 3.99e-01 | 72.8% | 72.0% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.58 | 41.0 | 3.97e-01 | 73.8% | 88.1% |
| 2l7kA00 | 1.10.10.1850 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sporulation protein-like | 0.57 | 30.0 | 3.43e-01 | 78.6% | 67.1% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 37.0 | 3.83e-01 | 72.8% | 70.1% |
| 3pvlA01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.56 | 45.0 | 3.58e-01 | 85.4% | 59.6% |
| 3fghA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.56 | 30.0 | 3.62e-01 | 87.4% | 79.1% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 38.0 | 3.64e-01 | 70.9% | 77.9% |
| 4j8sA00 | 1.25.40.840 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain | 0.53 | 40.0 | 3.39e-01 | 84.5% | 46.7% |
| 1dlcA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.53 | 41.0 | 3.25e-01 | 84.5% | 65.5% |
| 3u66A00 | 1.25.40.590 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU | 0.52 | 44.0 | 3.88e-01 | 98.1% | 92.9% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.50 | 41.0 | 3.99e-01 | 97.1% | 78.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4150595 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.71 | 55.0 | 3.71e-01 | 82.5% | 48.6% |
| 3580816 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.68 | 55.0 | 4.66e-01 | 89.3% | 74.3% |
| 3484112 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 46.0 | 4.14e-01 | 85.4% | 70.3% |
| 3941003 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 3.85e-01 | 96.1% | 45.3% |
| 3578718 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.58 | 42.0 | 4.37e-01 | 92.2% | 81.1% |
| 3688281 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.56 | 31.0 | 3.25e-01 | 92.2% | 58.9% |
| None | — | 0.56 | 44.0 | 2.98e-01 | 85.4% | 23.7% | |
| 3189192 | 109.4.1.510 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HbrB | 0.55 | 44.0 | 3.49e-01 | 91.3% | 56.0% |
| 3614573 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 42.0 | 3.02e-01 | 85.4% | 28.8% |
| 5064041 | 4271.1.1.0 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like | 0.54 | 42.0 | 3.44e-01 | 86.4% | 75.6% |
| 4956156 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 41.0 | 4.07e-01 | 89.3% | 79.1% |
| 3591288 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.52 | 37.0 | 3.54e-01 | 74.8% | 63.2% |
| 4481434 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.51 | 43.0 | 2.90e-01 | 96.1% | 92.3% |