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nonstructural_protein_NS2
Euk-VirRodent_hepacivirus
nonstructural_protein_NS2__YP_007905988__Rodent_hepacivirus__1281454
Identity
- Accession:
- YP_007905988 ↗
- Protein ID:
- nonstructural_protein_NS2
- Kingdom:
- euk
Quality
80.5
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Hepacivirus›
Rodent_hepacivirus
TaxID: 1281454
Cluster
View cluster (17 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-90
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.82 | 54.0 | 6.28e-01 | 72.7% | 96.7% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 54.0 | 6.45e-01 | 71.6% | 100.0% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 52.0 | 6.00e-01 | 73.9% | 92.1% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 53.0 | 5.51e-01 | 79.5% | 72.3% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 52.0 | 5.52e-01 | 77.3% | 76.9% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 54.0 | 6.25e-01 | 73.9% | 100.0% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 55.0 | 5.72e-01 | 73.9% | 90.1% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.77 | 58.0 | 5.77e-01 | 79.5% | 76.7% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 59.0 | 4.99e-01 | 80.7% | 68.3% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.76 | 57.0 | 5.36e-01 | 79.5% | 78.5% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 54.0 | 5.70e-01 | 73.9% | 92.2% |
| 2gd5A00 | 6.10.140.1230 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 57.0 | 4.81e-01 | 79.5% | 51.4% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 60.0 | 6.02e-01 | 85.2% | 87.8% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.74 | 56.0 | 3.90e-01 | 79.5% | 26.5% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.74 | 51.0 | 5.85e-01 | 71.6% | 100.0% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 58.0 | 5.68e-01 | 84.1% | 78.1% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 51.0 | 5.38e-01 | 76.1% | 80.5% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.74 | 56.0 | 5.23e-01 | 79.5% | 66.0% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 48.0 | 4.92e-01 | 70.5% | 69.0% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.73 | 61.0 | 6.20e-01 | 89.8% | 94.2% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 59.0 | 5.45e-01 | 86.4% | 72.5% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.73 | 51.0 | 4.88e-01 | 79.5% | 63.4% |
| 3zgxA02 | 6.10.140.1720 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 52.0 | 5.20e-01 | 76.1% | 83.5% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 53.0 | 4.97e-01 | 78.4% | 66.4% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 53.0 | 5.07e-01 | 78.4% | 73.5% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.71 | 50.0 | 4.63e-01 | 72.7% | 61.8% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.71 | 54.0 | 4.16e-01 | 80.7% | 39.0% |
| 3fd9A03 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.70 | 50.0 | 5.33e-01 | 76.1% | 89.0% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 50.0 | 5.42e-01 | 79.5% | 95.8% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 50.0 | 5.42e-01 | 76.1% | 94.4% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.68 | 52.0 | 5.04e-01 | 85.2% | 73.5% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.68 | 47.0 | 5.22e-01 | 79.5% | 94.0% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 50.0 | 4.17e-01 | 79.5% | 45.3% |
| 6tqfA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.67 | 50.0 | 3.27e-01 | 79.5% | 18.7% |
| 1ucuA01 | 6.10.280.190 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 47.0 | 5.16e-01 | 75.0% | 98.5% |
| 6bl6B01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.65 | 50.0 | 3.45e-01 | 83.0% | 60.8% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 48.0 | 4.74e-01 | 79.5% | 90.6% |
| 6h9xA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.65 | 48.0 | 4.65e-01 | 79.5% | 70.6% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 49.0 | 5.28e-01 | 83.0% | 96.0% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 45.0 | 5.00e-01 | 77.3% | 98.5% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.62 | 50.0 | 5.08e-01 | 88.6% | 90.7% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 46.0 | 4.67e-01 | 79.5% | 80.7% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 41.0 | 4.68e-01 | 71.6% | 90.8% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.61 | 49.0 | 5.02e-01 | 100.0% | 96.5% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 50.0 | 3.68e-01 | 100.0% | 46.9% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028999 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.80 | 57.0 | 6.53e-01 | 75.0% | 100.0% |
| 4945888 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.77 | 56.0 | 5.92e-01 | 76.1% | 85.0% |
| 4259224 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 58.0 | 4.77e-01 | 79.5% | 45.8% |
| 3385717 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 53.0 | 4.25e-01 | 79.5% | 37.6% |
| 4932148 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.76 | 57.0 | 5.05e-01 | 79.5% | 94.4% |
| 4043484 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.75 | 57.0 | 5.28e-01 | 79.5% | 66.4% |
| 3221921 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.75 | 57.0 | 5.44e-01 | 79.5% | 94.0% |
| 4320306 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.75 | 55.0 | 5.06e-01 | 76.1% | 62.7% |
| 3975632 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.75 | 54.0 | 4.22e-01 | 76.1% | 55.7% |
| 3253283 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.74 | 60.0 | 5.85e-01 | 86.4% | 83.2% |
| 3962991 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.74 | 56.0 | 4.27e-01 | 79.5% | 43.6% |
| 3678035 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.74 | 53.0 | 5.85e-01 | 76.1% | 95.7% |
| 3468090 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.73 | 55.0 | 4.98e-01 | 78.4% | 63.5% |
| 4042007 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 55.0 | 5.11e-01 | 79.5% | 64.5% |
| 4429194 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 55.0 | 5.09e-01 | 79.5% | 64.5% |
| 3971049 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.70 | 54.0 | 3.81e-01 | 84.1% | 95.9% |
| 4210642 | 3755.1.1.12 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ | 0.70 | 51.0 | 4.46e-01 | 76.1% | 62.3% |
| 3973899 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.70 | 50.0 | 4.27e-01 | 76.1% | 47.6% |
| 3978264 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.69 | 50.0 | 4.18e-01 | 76.1% | 46.0% |
| 3415405 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.69 | 56.0 | 3.55e-01 | 88.6% | 61.8% |
| 3973283 | 325.1.7.27 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › HH_AprE | 0.69 | 51.0 | 4.00e-01 | 79.5% | 37.9% |
| 4937014 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.68 | 48.0 | 3.16e-01 | 76.1% | 17.4% |
| 4877536 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.67 | 50.0 | 3.48e-01 | 79.5% | 24.5% |
| 4395939 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.67 | 50.0 | 3.63e-01 | 79.5% | 93.7% |
| 4499889 | 192.24.1.1 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RPC3_helical | 0.67 | 50.0 | 4.95e-01 | 79.5% | 80.6% |
| 3240682 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.66 | 49.0 | 4.58e-01 | 79.5% | 67.3% |
| 3197615 | 3755.3.1.355 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Uds1 | 0.66 | 50.0 | 4.55e-01 | 84.1% | 73.6% |
| 3981585 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.65 | 48.0 | 5.12e-01 | 79.5% | 90.7% |
| 3840064 | 192.24.1.0 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain | 0.65 | 47.0 | 4.63e-01 | 77.3% | 89.5% |
| 3973636 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 48.0 | 5.08e-01 | 79.5% | 93.3% |
| 3589462 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.64 | 48.0 | 3.72e-01 | 79.5% | 37.9% |
| 3944501 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.63 | 46.0 | 4.79e-01 | 78.4% | 87.5% |
| 5019536 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.63 | 47.0 | 3.52e-01 | 79.5% | 38.2% |
| 3400593 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.62 | 47.0 | 3.75e-01 | 79.5% | 40.6% |
D2
medium
residues 154-197
Domain cluster:
rep: putative_NS2_peptide__YP_009227301__Human_pegivirus_2__1729141__D193-239
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.81 | 60.0 | 4.98e-01 | 79.5% | 55.4% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.78 | 57.0 | 4.86e-01 | 79.5% | 56.3% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.76 | 56.0 | 4.41e-01 | 79.5% | 43.3% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 48.0 | 4.00e-01 | 81.8% | 56.5% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 47.0 | 3.78e-01 | 79.5% | 54.1% |
| 2gmlA02 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.62 | 45.0 | 3.85e-01 | 79.5% | 63.5% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 45.0 | 3.49e-01 | 79.5% | 61.8% |
| 2j8hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 45.0 | 3.59e-01 | 81.8% | 47.4% |
| 1xkpB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.62 | 45.0 | 3.37e-01 | 81.8% | 39.7% |
| 1avaA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 44.0 | 4.03e-01 | 79.5% | 58.6% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 41.0 | 3.68e-01 | 70.5% | 66.2% |
| 2kdgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 3.45e-01 | 81.8% | 45.0% |
| 2kkqA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 43.0 | 3.29e-01 | 81.8% | 39.7% |
| 2dm2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 3.35e-01 | 81.8% | 41.8% |
| 2ougA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.59 | 46.0 | 3.40e-01 | 93.2% | 80.1% |
| 1owqA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.59 | 43.0 | 3.72e-01 | 77.3% | 100.0% |
| 1fhgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 42.0 | 3.33e-01 | 81.8% | 44.1% |
| 1u2hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 3.34e-01 | 81.8% | 46.9% |
| 3ezuA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.57 | 44.0 | 3.17e-01 | 88.6% | 68.9% |
| 6swc801 | 3.30.30.170 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.57 | 41.0 | 3.11e-01 | 79.5% | 39.7% |
| 1ng4A02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.57 | 42.0 | 3.07e-01 | 84.1% | 54.3% |
| 1epfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 3.32e-01 | 81.8% | 50.0% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.57 | 41.0 | 3.07e-01 | 81.8% | 55.6% |
| 1vw4F02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.56 | 40.0 | 3.29e-01 | 79.5% | 57.6% |
| 3v6oB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 3.21e-01 | 81.8% | 51.0% |
| 6pwjA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.55 | 42.0 | 2.97e-01 | 88.6% | 60.0% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.17e-01 | 81.8% | 43.3% |
| 4m8rA01 | 2.60.40.3920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 40.0 | 3.12e-01 | 79.5% | 55.3% |
| 2yrlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.28e-01 | 79.5% | 53.0% |
| 5k6xA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.20e-01 | 81.8% | 51.1% |
| 5l9sB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 43.0 | 2.90e-01 | 100.0% | 44.8% |
| 1wqsA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 37.0 | 3.36e-01 | 81.8% | 58.6% |
| 2xa7M01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 39.0 | 3.10e-01 | 95.5% | 70.8% |
| 4gc1A01 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.52 | 35.0 | 2.88e-01 | 77.3% | 33.7% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 36.0 | 3.14e-01 | 81.8% | 58.2% |
| 2vraA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 2.95e-01 | 84.1% | 44.6% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4427237 | 3374.1.1.2 ↗ | a+b complex topology › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › Hydrolase_2 | 0.73 | 56.0 | 3.94e-01 | 84.1% | 30.4% |
| 3250056 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 50.0 | 3.67e-01 | 79.5% | 48.0% |
| 4118631 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.67 | 49.0 | 4.72e-01 | 79.5% | 92.0% |
| 3252659 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.65 | 47.0 | 3.74e-01 | 79.5% | 53.7% |
| 4971139 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.63 | 46.0 | 4.10e-01 | 79.5% | 53.8% |
| 4231688 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 45.0 | 3.61e-01 | 79.5% | 68.0% |
| 3250162 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 43.0 | 3.49e-01 | 79.5% | 56.8% |
| 5082028 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.59 | 44.0 | 3.03e-01 | 81.8% | 22.5% |
| 4958791 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 42.0 | 3.90e-01 | 79.5% | 58.3% |
| 1877510 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.58 | 42.0 | 3.50e-01 | 81.8% | 45.9% |
| 1173367 | 304.6.1.7 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › DUF5639 | 0.58 | 48.0 | 3.75e-01 | 100.0% | 73.3% |
| 4948624 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.57 | 42.0 | 2.87e-01 | 79.5% | 23.0% |
| 5059518 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.16e-01 | 79.5% | 47.3% |
| 4987649 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.57 | 40.0 | 2.57e-01 | 75.0% | 67.8% |
| 6702 | 244.1.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO | 0.57 | 43.0 | 3.51e-01 | 84.1% | 86.4% |
| 1811230 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.57 | 41.0 | 2.94e-01 | 79.5% | 25.2% |
| 2444013 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 41.0 | 3.30e-01 | 81.8% | 47.9% |
| 3474499 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.55 | 41.0 | 2.40e-01 | 84.1% | 14.7% |
| 3579128 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 3.22e-01 | 79.5% | 62.8% |
| 3796583 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 38.0 | 2.86e-01 | 93.2% | 82.6% |