←Back to structures
nonstructural_protein_NS3
Euk-VirTembusu_virus
nonstructural_protein_NS3__YP_004734464_nonstructural_protein_NS3__Tembusu_virus__64293
Identity
- Accession:
- YP_004734464_nonstructural_protein_NS3 ↗
- Protein ID:
- nonstructural_protein_NS3
- Kingdom:
- euk
Quality
84.5
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Orthoflavivirus›
Tembusu_virus
TaxID: 64293
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 334-475
Domain cluster:
rep: B962L__YP_009703129__African_swine_fever_virus__10497__D237-425
D2
high
residues 547-616
Domain cluster:
rep: non-structural_protein_NS3__NP_776005__Yellow_fever_virus__11089__D541-620
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20907.3 best | Flav_NS3-hel_C | 92.2 | 3.60e-26 | 100.0% | 48.6% |
D3
medium
residues 13-96
Domain cluster:
rep: peptidase_S7__YP_009553732__Kampung_Karu_virus__2045186__D3-61
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00949.28 best | Peptidase_S7 | 59.9 | 3.50e-16 | 96.4% | 59.5% |
D4
medium
residues 181-321
Domain cluster:
rep: LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00177__D121-323
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00270.36 best | DEAD | 35.5 | 1.20e-08 | 100.0% | 86.8% |
| PF04851.22 | ResIII | 23.8 | 5.10e-05 | 100.0% | 86.6% |
| PF07652.21 | Flavi_DEAD | 230.4 | 1.10e-68 | 97.9% | 92.6% |
D5
medium
residues 482-546
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20907.3 best | Flav_NS3-hel_C | 90.4 | 1.40e-25 | 100.0% | 44.4% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i7dA02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.61 | 50.0 | 3.78e-01 | 95.4% | 96.1% |
| 2d7eA01 | 3.40.1440.60 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain | 0.53 | 41.0 | 3.79e-01 | 100.0% | 64.4% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 44.0 | 3.41e-01 | 98.5% | 74.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 286894 | 5101.1.1.1 ↗ | alpha arrays › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase › Flav_NS3-hel_C | 0.96 | 91.0 | 6.73e-01 | 100.0% | 44.2% |
| 53546 | 5101.1.1.0 ↗ | alpha arrays › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase | 0.94 | 87.0 | 6.55e-01 | 96.9% | 46.3% |
| 4878071 | 5101.1.1.1 ↗ | alpha arrays › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase › Flav_NS3-hel_C | 0.92 | 86.0 | 6.41e-01 | 100.0% | 44.5% |